Evidence map›Paper›PMID 31948942›Full record

ArticleCancer research2020

An ABC Transporter Drives Medulloblastoma Pathogenesis by Regulating Sonic Hedgehog Signaling.

Juwina Wijaya, BaoHan T Vo, Jingjing Liu, Beisi Xu, Gang Wu, Yao Wang, Junmin Peng, Jin Zhang, Laura J Janke, Brent A Orr and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Juwina WijayaDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee.
BaoHan T VoDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Jingjing LiuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0002-8184-8382
Beisi XuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-0099-858X
Gang WuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Yao WangDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee.
Junmin PengCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, Tennessee.
Jin ZhangDepartment of Pharmacology, University of California, San Diego, California.
Laura J JankeDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee.
Brent A OrrDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-0997-4728
Jiyang YuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0003-3629-4330
Martine F RousselDepartment of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.
John D SchuetzDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee. john.schuetz@stjude.org.
St. Jude Children's Research Hospital · USUniversity of California San Diego · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The DNA Damage Response and Tumorigenesis in the BrainP01CA096832 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BAKER, SUZANNE J. · 2003 to 2025
$38.0M
Transporters and MedulloblastomaR01CA194057 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SCHUETZ, JOHN D · 2015 to 2025
$4.0M
Transporters and hematopoietic toxicityR01CA194206 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SCHUETZ, JOHN D · 2016 to 2020
$2.4M
Multi-level Integrative Proteomics to Alzheimer's Disease PathwaysR01AG053987 · NIA · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI PENG, JUNMIN · 2016 to 2020
$2.2M
Intracellular and Intercellular Network Rewiring and Hidden Driver Inference from Single-Cell DataR01GM134382 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI YU, JIYANG · 2019 to 2023
$1.7M
NCI NIH HHS P01 CA096832NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA194057NCI NIH HHS R01 CA194206NIA NIH HHS R01 AG053987NIGMS NIH HHS R01 GM134382
6 · The paper itself

Abstract

Mutations in Sonic hedgehog (SHH) signaling promote aberrant proliferation and tumor growth. SHH-medulloblastoma (MB) is among the most frequent brain tumors in children less than 3 years of age. Although key components of the SHH pathway are well-known, we hypothesized that new disease-modifying targets of SHH-MB might be identified from large-scale bioinformatics and systems biology analyses. Using a data-driven systems biology approach, we built a MB-specific interactome. The ATP-binding cassette transporter ABCC4 was identified as a modulator of SHH-MB. Accordingly, increased

Indexed as

AnimalsATP-Binding Cassette, Sub-Family C ProteinsBrain NeoplasmsCell Line, TumorChildDatasets as TopicDisease Models, AnimalFollow-Up StudiesGene Expression Regulation, NeoplasticGene Knockdown TechniquesHedgehog ProteinsHumansKaplan-Meier EstimateMedulloblastomaMiceMice, KnockoutABCC4 protein, humanAbcc4 protein, mouseATP-Binding Cassette, Sub-Family C ProteinsGLI3 protein, humanHedgehog ProteinsNerve Tissue ProteinsZinc Finger Protein Gli3

Identifiers

PMID31948942
PMCPMC7416697
OpenAlexW3000322478

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.