Evidence map›Paper›PMID 31948110›Full record

ArticleGenes2020

Genomic Selection for Optimum Index with Dry Biomass Yield, Dry Mass Fraction of Fresh Material, and Plant Height in Biomass Sorghum.

Ephrem Habyarimana, Marco Lopez-Cruz, Faheem S Baloch

Abstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ephrem HabyarimanaCREA Research Center for Cereals and Industrial Crops, via di Corticella 133-40128 Bologna, Italy.
Marco Lopez-CruzCrop, Soil, and Microbial Sciences Department, Michigan State University, 1066 Bogue St, East Lansing, MI 42824, USA.
Faheem S BalochDepartment of Field Crops, Faculty of Agricultural and Natural Sciences, Abant Izzet Baysal University, Bolu 14030, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorghum is one of the world's major crops, expresses traits for resilience to climate change, and can be used for several purposes including food and clean fuels. Multiple-trait genomic prediction and selection models were implemented using genotyping-by-sequencing single nucleotide polymorphism markers and phenotypic data information. We demonstrated for the first time the efficiency genomic selection modelling of index selection including biofuel traits such as aboveground biomass yield, plant height, and dry mass fraction of the fresh material. This work also sheds light, for the first time, on the promising potential of using the information from the populations grown from seed to predict the performance of the populations regrown from the rhizomes-even two winter seasons after the original trial was sown. Genomic selection modelling of the optimum index selection including the three traits of interest (plant height, aboveground dry biomass yield, and dry mass fraction of fresh mass material) was the most promising. Since the plant characteristics evaluated herein are routinely measured in cereal and other plant species of agricultural interest, it can be inferred that the findings can be transferred in other major crops.

Indexed as

BiofuelsBiomassCrops, AgriculturalEdible GrainForecastingGenetic TestingGenome, PlantGenomicsGenotypePhenotypePolymorphism, Single NucleotideQuantitative Trait LociSorghumBiofuelsbiomassGBS SNPgenomic predictiongenomic selectionindex selectionoptimum indexplant heightSorghum bicolorSorghum halepenseyield

Identifiers

PMID31948110
PMCPMC7017155

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.