Evidence map›Paper›PMID 31947864›Full record

ArticleBiomolecules2020

Voltage Sensing in Bacterial Protein Translocation.

Denis G Knyazev, Roland Kuttner, Ana-Nicoleta Bondar, Mirjam Zimmerman, Christine Siligan, Peter Pohl

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. YidC fromBiomolecules · 2023
    Article
  3. Article
  4. Towards the Idea of Molecular Brains.International journal of molecular sciences · 2021
    Review
  5. Metabolites · 2021
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Denis G KnyazevInstitute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, 4020 Linz, Austria.
Roland KuttnerInstitute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, 4020 Linz, Austria.
Ana-Nicoleta BondarFreie Universität Berlin, Department of Physics, Theoretical Molecular Biophysics Group, Arnimallee 14, D-14195 Berlin, Germany.
Mirjam ZimmermanInstitute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, 4020 Linz, Austria.
Christine SiliganInstitute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, 4020 Linz, Austria.
Peter PohlInstitute of Biophysics, Johannes Kepler University Linz, Gruberstr. 40, 4020 Linz, Austria.
Johannes Kepler University of Linz · ATFreie Universität Berlin · DE

Funding

Austrian Science Fund P28213Austrian Science Fund P29841Austrian Science Fund FWF P 29841
6 · The paper itself

Abstract

The bacterial channel SecYEG efficiently translocates both hydrophobic and hydrophilic proteins across the plasma membrane. Translocating polypeptide chains may dislodge the plug, a half helix that blocks the permeation of small molecules, from its position in the middle of the aqueous translocation channel. Instead of the plug, six isoleucines in the middle of the membrane supposedly seal the channel, by forming a gasket around the translocating polypeptide. However, this hypothesis does not explain how the tightness of the gasket may depend on membrane potential. Here, we demonstrate voltage-dependent closings of the purified and reconstituted channel in the presence of ligands, suggesting that voltage sensitivity may be conferred by motor protein SecA, ribosomes, signal peptides, and/or translocating peptides. Yet, the presence of a voltage sensor intrinsic to SecYEG was indicated by voltage driven closure of pores that were forced-open either by crosslinking the plug to SecE or by plug deletion. We tested the involvement of SecY's half-helix 2b (TM2b) in voltage sensing, since clearly identifiable gating charges are missing. The mutation L80D accelerated voltage driven closings by reversing TM2b's dipolar orientation. In contrast, the L80K mutation decelerated voltage induced closings by increasing TM2b's dipole moment. The observations suggest that TM2b is part of a larger voltage sensor. By partly aligning the combined dipole of this sensor with the orientation of the membrane-spanning electric field, voltage may drive channel closure.

Indexed as

BacteriaBacterial ProteinsEscherichia coliEscherichia coli ProteinsHydrophobic and Hydrophilic InteractionsMembrane ProteinsPeptidesProtein TransportSEC Translocation ChannelsVoltage-Dependent Anion ChannelsBacterial ProteinsEscherichia coli ProteinsMembrane ProteinsPeptidesSEC Translocation ChannelsVoltage-Dependent Anion ChannelsgatingSec61SecYtranslocon

Identifiers

PMID31947864
PMCPMC7023257
OpenAlexW2997716159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.