Evidence map›Paper›PMID 31945237›Full record

ArticlePlant biotechnology journal2020

Balancing the double-edged sword effect of increased resistant starch content and its impact on rice texture: its genetics and molecular physiological mechanisms.

Sabiha Parween, Joanne J Anonuevo, Vito M Butardo, Gopal Misra, Roslen Anacleto, Cindy Llorente, Ondrej Kosik, Marissa V Romero, Evelyn H Bandonill, Merlyn S Mendioro and 4 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Unlocking Low-glycemic Potential in Rice: Genetic Insights and Breeding Strategies.Plant foods for human nutrition (Dordrecht, Netherlands) · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Evolution of plant metabolism: the state-of-the-art.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  8. Article
  9. Article
  10. Loss of function ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Sabiha ParweenInternational Rice Research Institute, Metro Manila, Philippines.
Joanne J AnonuevoInternational Rice Research Institute, Metro Manila, Philippines.
Vito M ButardoInternational Rice Research Institute, Metro Manila, Philippines.
Gopal MisraInternational Rice Research Institute, Metro Manila, Philippines.
Roslen AnacletoInternational Rice Research Institute, Metro Manila, Philippines.
Cindy LlorenteInternational Rice Research Institute, Metro Manila, Philippines.
Ondrej KosikDepartment of Plant Sciences, Rothamsted Research, Harpenden, Herts, UK.
Marissa V RomeroPhilippine Rice Research Institute, Maligaya, Science City of Muñoz, Philippines.
Evelyn H BandonillPhilippine Rice Research Institute, Maligaya, Science City of Muñoz, Philippines.
Merlyn S MendioroInstitute of Biological Sciences, College of Arts and Science, University of Philippines, Los Banos, Philippines.
Alison LovegroveDepartment of Plant Sciences, Rothamsted Research, Harpenden, Herts, UK.
Alisdair R FernieMax-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Yariv BrotmanDepartment of Life Sciences, Ben-Gurion University of the Negev, Beersheba, Israel.
Nese SreenivasuluInternational Rice Research Institute, Metro Manila, Philippines.ORCID 0000-0002-3998-038X
International Rice Research Institute · PHPhilippine Rice Research Institute · PHRothamsted Research · GBBen-Gurion University of the Negev · ILMax Planck Institute of Molecular Plant Physiology · DEUniversity of the Philippines Los Baños · PH

Funding

Biotechnology and Biological Sciences Research Council BB/N013808/1
6 · The paper itself

Abstract

Resistant starch (RS) is the portion of starch that escapes gastrointestinal digestion and acts as a substrate for fermentation of probiotic bacteria in the gut. Aside from enhancing gut health, RS contributes to a lower glycemic index. A genome-wide association study coupled with targeted gene association studies was conducted utilizing a diverse panel of 281 resequenced Indica rice lines comprising of ~2.2 million single nucleotide polymorphisms. Low-to-intermediate RS phenotypic variations were identified in the rice diversity panel, resulting in novel associations of RS to several genes associated with amylopectin biosynthesis and degradation. Selected rice lines encoding superior alleles of SSIIa with medium RS and inferior alleles with low RS groups were subjected to detailed transcriptomic, metabolomic, non-starch dietary fibre (DF), starch structural and textural attributes. The gene regulatory networks highlighted the importance of a protein phosphatase alongside multiple genes of starch metabolism. Metabolomics analyses resulted in the identification of several metabolite hubs (carboxylic acid, sugars and polyamines) in the medium RS group. Among DF, mannose and galactose from the water-insoluble fraction were found to be highly associated with low and medium RS lines, respectively. Starch structural analyses revealed that a moderate increase in RS is also linked to an elevation of amylose 1 and amylose 2 fractions. Although rice lines with medium RS content negatively affected textural and viscosity properties in comparison to low RS, the textural property of medium RS lines was in the same acceptable range as IR64, a rice mega variety popular in Asia.

Indexed as

OryzaAmylopectinAmyloseGenome-Wide Association StudyStarchViscosityAmylopectinAmyloseStarchgenome-wide association studygrain qualitymetabolomicsnon-starch dietary fibreregulatory networksresistant starchsensorystarch structuretexturetranscriptomics

Identifiers

PMID31945237
PMCPMC7336377
OpenAlexW2999737827

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.