Evidence map›Paper›PMID 31945134›Full record

ArticlePloS one2020

Tripartite factors leading to molecular divergence between human and murine smooth muscle.

Soo Jung Lee, Sabrina Blanchett-Anderson, Simon G Keep, Mitchell B Gasche, Michael M Wang

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Brain arteriolosclerosis.Acta neuropathologica · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Soo Jung LeeDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.
Sabrina Blanchett-AndersonDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.
Simon G KeepDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.
Mitchell B GascheDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.
Michael M WangDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-5670-2496
University of Michigan · US

Funding

NOTCH3 N-terminal fragmentation in cerebral small vessel diseaseR01NS099160 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WANG, MICHAEL M · 2018 to 2022
$1.6M
Promoting Diversity of Future ScientistsR25HL108842 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Susan V Brooks · 2011 to 2026
$1.3M
Identification and functional analysis of novel human-specific small vessel disease proteinsR21NS099783 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WANG, MICHAEL M · 2016 to 2017
$347k
Pathological protein generation in cerebral small vessel diseaseI01BX003824 · VA · VETERANS HEALTH ADMINISTRATION · PI Michael M Wang · 2017 to 2026
–
Transformation of NOTCH3 protein in cerebral small vessel diseaseI01BX003855 · VA · VETERANS HEALTH ADMINISTRATION · PI WANG, MICHAEL M · 2018 to 2021
–
BLRD VA I01 BX003824BLRD VA I01 BX003855NHLBI NIH HHS R25 HL108842NINDS NIH HHS R01 NS099160NINDS NIH HHS R21 NS099783
6 · The paper itself

Abstract

A large number of pre-clinical and developmental investigations involve experimental vertebrate animals, of which mice have emerged as a favored organism. Recognition of the differences between humans and mice is essential for assessment of the relevance of animal studies to humans. The primary purpose of this study was to gauge the conservation between human and mouse vascular smooth muscle cell (VSMC) proteins mined from an analysis of the Human Protein Atlas. Two comparison were made: a) immunohistochemistry for 16 proteins in brain, heart, esophagus, bladder, stomach, lung, kidney, and aorta enabled comparison between human and mouse of protein localization in VSMC and non-vascular SMC; and b) multi-species primary protein sequence analysis of an expanded set vascular molecules enabled comparison between VSMC sequences among vertebrate species. In total, three dimensions of diversity were uncovered. First, a significant number of factors show human/mouse differences in cellular expression; these differences occurred in both VSMC and non-vascular SMC in an organ and cell-type dependent fashion. Many markers demonstrated notable cell-to-cell and regional heterogeneity in VSMC of the aorta and non-vascular SMC of the esophagus, bladder, and stomach. Second, species specificity can arise by genetic deletions as exemplified by the human protein adipogenesis regulatory factor (ADIRF), which is not present due to a large sequence gap in mice. Third, we describe significant cross-species protein sequence divergence in selected VSMC proteins which may result in altered orthologue function. In a sample of 346 vascular molecules, 15% demonstrate incomplete vertebrate species gene conservation. Divergence of predicted human/mouse VSMC protein sequences is higher than for endothelial proteins in all species examined. In the future, each of these three cross-species differences could be neutralized using gene manipulation, resulting in improved translational potential of murine experimental models.

Indexed as

AnimalsBiomarkersConserved SequenceDatabases, ProteinGenetic VariationHumansImmunohistochemistryMiceMuscle ProteinsMuscle, SmoothMuscle, Smooth, VascularMyocytes, Smooth MuscleSpecies SpecificityTissue DistributionBiomarkersMuscle Proteins

Identifiers

PMID31945134
PMCPMC6964862
OpenAlexW2999289272

What OpenQuestion holds

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LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.