Evidence map›Paper›PMID 31945063›Full record

ArticlePloS one2020

Quantification of microaerobic growth of Geobacter sulfurreducens.

Christina Elisabeth Anna Engel, David Vorländer, Rebekka Biedendieck, Rainer Krull, Katrin Dohnt

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Exploring oxidative stress pathways inFrontiers in microbiology · 2023
    Article
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  8. Article
  9. A noncanonical cytochromeProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Reduction Kinetic of Water Soluble Metal Salts byFrontiers in microbiology · 2022
    Article
  11. Analytics in Microfluidic Systems.Advances in biochemical engineering/biotechnology · 2022
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Christina Elisabeth Anna EngelInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.ORCID 0000-0002-2951-4879
David VorländerInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.
Rebekka BiedendieckInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.ORCID 0000-0002-3567-6196
Rainer KrullInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.
Katrin DohntInstitute of Biochemical Engineering, Technische Universität Braunschweig, Braunschweig, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Geobacter sulfurreducens was originally considered a strict anaerobe. However, this bacterium was later shown to not only tolerate exposure to oxygen but also to use it as terminal electron acceptor. Research performed has so far only revealed the general ability of G. sulfurreducens to reduce oxygen, but the oxygen uptake rate has not been quantified yet, nor has evidence been provided as to how the bacterium achieves oxygen reduction. Therefore, microaerobic growth of G. sulfurreducens was investigated here with better defined operating conditions as previously performed and a transcriptome analysis was performed to elucidate possible metabolic mechanisms important for oxygen reduction in G. sulfurreducens. The investigations revealed that cell growth with oxygen is possible to the same extent as with fumarate if the maximum specific oxygen uptake rate (sOUR) of 95 mgO2 gCDW-1 h-1 is not surpassed. Hereby, the entire amount of introduced oxygen is reduced. When oxygen concentrations are too high, cell growth is completely inhibited and there is no partial oxygen consumption. Transcriptome analysis suggests a menaquinol oxidase to be the enzyme responsible for oxygen reduction. Transcriptome analysis has further revealed three different survival strategies, depending on the oxygen concentration present. When prompted with small amounts of oxygen, G. sulfurreducens will try to escape the microaerobic area; if oxygen concentrations are higher, cells will focus on rapid and complete oxygen reduction coupled to cell growth; and ultimately cells will form protective layers if a complete reduction becomes impossible. The results presented here have important implications for understanding how G. sulfurreducens survives exposure to oxygen.

Indexed as

Bacteria, AerobicBacteria, AnaerobicBacterial ProteinsFerric CompoundsFumaratesGene Expression ProfilingGene Expression Regulation, BacterialGeobacterOxidation-ReductionOxygenTranscriptomeBacterial ProteinsFerric CompoundsFumaratesOxygen

Identifiers

PMID31945063
PMCPMC6964889

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.