Evidence map›Paper›PMID 31944164›Full record

ArticleAutophagy2020

Cytosolic domain of SIDT2 carries an arginine-rich motif that binds to RNA/DNA and is important for the direct transport of nucleic acids into lysosomes.

Katsunori Hase, Viorica Raluca Contu, Chihana Kabuta, Ryohei Sakai, Masayuki Takahashi, Naoyuki Kataoka, Fumihiko Hakuno, Shin-Ichiro Takahashi, Yuuki Fujiwara, Keiji Wada and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Katsunori HaseDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.
Viorica Raluca ContuDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.ORCID 0000-0003-1978-4055
Chihana KabutaDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.
Ryohei SakaiDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.
Masayuki TakahashiDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.
Naoyuki KataokaDepartment of Animal Sciences, Graduate School of Agriculture and Life Sciences, The University of Tokyo , Bunkyo-ku, Japan.ORCID 0000-0002-4498-7420
Fumihiko HakunoDepartment of Animal Sciences, Graduate School of Agriculture and Life Sciences, The University of Tokyo , Bunkyo-ku, Japan.
Shin-Ichiro TakahashiDepartment of Animal Sciences, Graduate School of Agriculture and Life Sciences, The University of Tokyo , Bunkyo-ku, Japan.
Yuuki FujiwaraDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.ORCID 0000-0003-1032-7755
Keiji WadaDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.
Tomohiro KabutaDepartment of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry , Kodaira, Japan.ORCID 0000-0002-3058-2596
National Center of Neurology and Psychiatry · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNautophagy and DNautophagy (RDA) are unconventional autophagic pathways where nucleic acids are directly transported through the lysosomal membrane, then degraded inside lysosomes. We have previously shown that bitopic protein LAMP2C and putative RNA transporter SIDT2, both lysosomal membrane proteins, mediate the direct transport of nucleic acids into lysosomes and that LAMP2C interacts with the nucleic acids and functions as a receptor during RDA. Because SIDT2-mediated RDA occurs in isolated lysosomes that lack LAMP2C, in this study, we tested the hypothesis that SIDT2 itself could also interact with the nucleic acids. Our results show that SIDT2 directly binds RNA and DNA through an arginine-rich motif (ARM) located within its main cytosolic domain, and disruption of this motif dramatically impairs SIDT2-mediated RNautophagic activity. We also found that SIDT2 interacts with exon 1 of

Indexed as

AnimalsArginineAutophagyEndoplasmic Reticulum Chaperone BiPLysosomal Membrane ProteinsLysosomesMiceNucleic AcidsNucleotide Transport ProteinsRNA InterferenceRNA TransportArginineEndoplasmic Reticulum Chaperone BiPHspa5 protein, mouseLysosomal Membrane ProteinsNucleic AcidsNucleotide Transport ProteinsSidt2 protein, mouseArginine-rich motifautophagyDNADNautophagyLAMP2ClysosomeRNARNautophagySIDT2

Identifiers

PMID31944164
PMCPMC7595612
OpenAlexW2999593898

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.