Evidence map›Paper›PMID 31943118›Full record

ArticleNucleic acids research2020

ZRANB2 and SYF2-mediated splicing programs converging on ECT2 are involved in breast cancer cell resistance to doxorubicin.

Iris Tanaka, Alina Chakraborty, Olivier Saulnier, Clara Benoit-Pilven, Sophie Vacher, Dalila Labiod, Eric W F Lam, Ivan Bièche, Olivier Delattre, Frédéric Pouzoulet and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Iris TanakaInstitut Curie, PSL Research University, CNRS UMR 3348, F-91405 Orsay, France.
Alina ChakrabortyInstitut Curie, PSL Research University, CNRS UMR 3348, F-91405 Orsay, France.
Olivier SaulnierInstitut Curie Research Center, SIREDO Oncology Center, Paris-Sciences-Lettres Research University, INSERM U830, Laboratory of Biology and Genetics of Cancers, Paris, France; Université Paris Diderot, Sorbonne Paris Cité, France.
Clara Benoit-PilvenCNRS UMR 5239, Ecole Normale Supérieure de Lyon, Lyon, France.
Sophie VacherUnité de Pharmacogénomique, Service de génétique, Institut Curie, Paris, France; Université Paris Descartes, Paris, France.
Dalila LabiodParis Sud University, Paris-Saclay University, CNRS UMR 3348, F-91405 Orsay, France.
Eric W F LamImperial College London, London, UK.
Ivan BiècheUnité de Pharmacogénomique, Service de génétique, Institut Curie, Paris, France; Université Paris Descartes, Paris, France.
Olivier DelattreInstitut Curie Research Center, SIREDO Oncology Center, Paris-Sciences-Lettres Research University, INSERM U830, Laboratory of Biology and Genetics of Cancers, Paris, France; Université Paris Diderot, Sorbonne Paris Cité, France.
Frédéric PouzouletParis Sud University, Paris-Saclay University, CNRS UMR 3348, F-91405 Orsay, France.
Didier AuboeufCNRS UMR 5239, Ecole Normale Supérieure de Lyon, Lyon, France.
Stéphan VagnerInstitut Curie, PSL Research University, CNRS UMR 3348, F-91405 Orsay, France.
Martin DutertreInstitut Curie, PSL Research University, CNRS UMR 3348, F-91405 Orsay, France.
Université Paris-Sud · FRInserm · FRUniversité Claude Bernard Lyon 1 · FRUniversité Paris Cité · FRImperial College London · GB

Funding

Cancer Research UK 12011
6 · The paper itself

Abstract

Besides analyses of specific alternative splicing (AS) variants, little is known about AS regulatory pathways and programs involved in anticancer drug resistance. Doxorubicin is widely used in breast cancer chemotherapy. Here, we identified 1723 AS events and 41 splicing factors regulated in a breast cancer cell model of acquired resistance to doxorubicin. An RNAi screen on splicing factors identified the little studied ZRANB2 and SYF2, whose depletion partially reversed doxorubicin resistance. By RNAi and RNA-seq in resistant cells, we found that the AS programs controlled by ZRANB2 and SYF2 were enriched in resistance-associated AS events, and converged on the ECT2 splice variant including exon 5 (ECT2-Ex5+). Both ZRANB2 and SYF2 were found associated with ECT2 pre-messenger RNA, and ECT2-Ex5+ isoform depletion reduced doxorubicin resistance. Following doxorubicin treatment, resistant cells accumulated in S phase, which partially depended on ZRANB2, SYF2 and the ECT2-Ex5+ isoform. Finally, doxorubicin combination with an oligonucleotide inhibiting ECT2-Ex5 inclusion reduced doxorubicin-resistant tumor growth in mouse xenografts, and high ECT2-Ex5 inclusion levels were associated with bad prognosis in breast cancer treated with chemotherapy. Altogether, our data identify AS programs controlled by ZRANB2 and SYF2 and converging on ECT2, that participate to breast cancer cell resistance to doxorubicin.

Indexed as

Drug Resistance, NeoplasmAdultAgedAged, 80 and overAlternative SplicingAnimalsBreast NeoplasmsCell Line, TumorCell ProliferationDoxorubicinEpithelial-Mesenchymal TransitionExonsFemaleGene Expression Regulation, NeoplasticHumansMCF-7 CellsDoxorubicinECT2 protein, humanGCIP-interacting protein p29, humanMicroRNAsProtein IsoformsProto-Oncogene ProteinsRNA-Binding ProteinsRNA Splice SitesZRANB2 protein, human

Identifiers

PMID31943118
PMCPMC7049692
OpenAlexW3000519102

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.