Evidence map›Paper›PMID 31942623›Full record

ArticleJournal of experimental botany2020

Three previously characterized resistances to yellow rust are encoded by a single locus Wtk1.

Valentyna Klymiuk, Andrii Fatiukha, Dina Raats, Valeria Bocharova, Lin Huang, Lihua Feng, Samidha Jaiwar, Curtis Pozniak, Gitta Coaker, Jorge Dubcovsky and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
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  8. Article
  9. Article
  10. The evolving battle between yellow rust and wheat: implications for global food security.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  11. Capturing Wheat Phenotypes at the Genome Level.Frontiers in plant science · 2022
    Review
  12. Article
  13. Article
  14. Tandem Protein Kinases Emerge as New Regulators of Plant Immunity.Molecular plant-microbe interactions : MPMI · 2021
    Review
  15. Article
  16. Genomic signatures of selection for resistance to stripe rust in Austrian winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  17. Article
  18. Article
  19. Distribution and Nucleotide Diversity ofPathogens (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Valentyna KlymiukInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Andrii FatiukhaInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Dina RaatsInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Valeria BocharovaInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Lin HuangInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Lihua FengInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Samidha JaiwarInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Curtis PozniakCrop Development Centre and Department of Plant Sciences, University of Saskatchewan, Saskatoon, Canada.
Gitta CoakerDepartment of Plant Pathology, University of California, One Shields Avenue, Davis, CA, USA.
Jorge DubcovskyDepartment of Plant Sciences, University of California, One Shields Avenue, Davis, CA, USA.
Tzion FahimaInstitute of Evolution, University of Haifa, Mt. Carmel, Haifa, Israel.
Carmel (Israel) · ILUniversity of Saskatchewan · CAHoward Hughes Medical Institute · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The wild emmer wheat (Triticum turgidum ssp. dicoccoides; WEW) yellow (stripe) rust resistance genes Yr15, YrG303, and YrH52 were discovered in natural populations from different geographic locations. They all localize to chromosome 1B but were thought to be non-allelic based on differences in resistance response. We recently cloned Yr15 as a Wheat Tandem Kinase 1 (WTK1) and show here that these three resistance loci co-segregate in fine-mapping populations and share an identical full-length genomic sequence of functional Wtk1. Independent ethyl methanesulfonate (EMS)-mutagenized susceptible yrG303 and yrH52 lines carried single nucleotide mutations in Wtk1 that disrupted function. A comparison of the mutations for yr15, yrG303, and yrH52 mutants showed that while key conserved residues were intact, other conserved regions in critical kinase subdomains were frequently affected. Thus, we concluded that Yr15-, YrG303-, and YrH52-mediated resistances to yellow rust are encoded by a single locus, Wtk1. Introgression of Wtk1 into multiple genetic backgrounds resulted in variable phenotypic responses, confirming that Wtk1-mediated resistance is part of a complex immune response network. WEW natural populations subjected to natural selection and adaptation have potential to serve as a good source for evolutionary studies of different traits and multifaceted gene networks.

Indexed as

Disease ResistancePlant DiseasesBasidiomycotaChromosome MappingGenes, PlantGenetic MarkersPoaceaeGenetic MarkersEMS mutantsphenotypic responsepositional cloningtandem kinase domainswild emmer wheatWtk1yellow rustYr15YrG303YrH52

Identifiers

PMID31942623
PMCPMC7210774
OpenAlexW2999560685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.