Evidence map›Paper›PMID 31941905›Full record

ArticleNature communications2020

A predator-prey interaction between a marine Pseudoalteromonas sp. and Gram-positive bacteria.

Bai-Lu Tang, Jie Yang, Xiu-Lan Chen, Peng Wang, Hui-Lin Zhao, Hai-Nan Su, Chun-Yang Li, Yang Yu, Shuai Zhong, Lei Wang and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 139 citations in OpenAlex.

  1. Peculiarities of the Interaction of the Bacteriolytic Protease Blp fromInternational journal of molecular sciences · 2026
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  3. Bacterial warfare at the molecular level:Current research in microbial sciences · 2026
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  4. Enrichment isolation and metabolic characteristics ofApplied and environmental microbiology · 2025
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  6. Applied and environmental microbiology · 2025
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  12. Review
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  15. Article
  16. Biosynthetic mechanism of the yellow pigments in the marine bacteriumApplied and environmental microbiology · 2024
    Article
  17. The resting cyst of dinoflagellateFrontiers in microbiology · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 3 countries.

Bai-Lu TangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Jie YangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Xiu-Lan ChenState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Peng WangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Hui-Lin ZhaoState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Hai-Nan SuState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Chun-Yang LiCollege of Marine Life Sciences, Institute for Advanced Ocean Study, Ocean University of China, Qingdao, 266003, China.
Yang YuState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Shuai ZhongState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Lei WangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Ian LidburySchool of Life Sciences, University of Warwick, Coventry, UK.
Haitao DingSOA Key Laboratory for Polar Science, Polar Research Institute of China, Shanghai, 200136, China.
Min WangCollege of Marine Life Sciences, Institute for Advanced Ocean Study, Ocean University of China, Qingdao, 266003, China.
Andrew McMinnCollege of Marine Life Sciences, Institute for Advanced Ocean Study, Ocean University of China, Qingdao, 266003, China.
Xi-Ying ZhangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China.
Yin ChenCollege of Marine Life Sciences, Institute for Advanced Ocean Study, Ocean University of China, Qingdao, 266003, China.ORCID http://orcid.org/0000-0002-0367-4276
Yu-Zhong ZhangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, 266237, China. zhangyz@sdu.edu.cn.
Shandong University · CNQingdao National Laboratory for Marine Science and Technology · CNUniversity of Warwick · GBOcean University of China · CNPolar Research Institute of China · CNUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Predator-prey interactions play important roles in the cycling of marine organic matter. Here we show that a Gram-negative bacterium isolated from marine sediments (Pseudoalteromonas sp. strain CF6-2) can kill Gram-positive bacteria of diverse peptidoglycan (PG) chemotypes by secreting the metalloprotease pseudoalterin. Secretion of the enzyme requires a Type II secretion system. Pseudoalterin binds to the glycan strands of Gram positive bacterial PG and degrades the PG peptide chains, leading to cell death. The released nutrients, including PG-derived D-amino acids, can then be utilized by strain CF6-2 for growth. Pseudoalterin synthesis is induced by PG degradation products such as glycine and glycine-rich oligopeptides. Genes encoding putative pseudoalterin-like proteins are found in many other marine bacteria. This study reveals a new microbial interaction in the ocean.

Indexed as

AlanineBacterial ProteinsCrystallography, X-RayGeologic SedimentsGlutamic AcidGram-Positive BacteriaMetalloproteasesMicrobial InteractionsMolecular Docking SimulationMutationPeptidoglycanPseudoalteromonasSeawaterStaphylococcusType II Secretion SystemsAlanineBacterial ProteinsGlutamic AcidMetalloproteasesPeptidoglycanType II Secretion Systems

Identifiers

PMID31941905
PMCPMC6962226
OpenAlexW3000479037

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.