Evidence map›Paper›PMID 31940838›Full record

ReviewInternational journal of environmental research and public health2020

Urbanization and Waterborne Pathogen Emergence in Low-Income Countries: Where and How to Conduct Surveys?

Alexandra Bastaraud, Philippe Cecchi, Pascal Handschumacher, Mathias Altmann, Ronan Jambou

Abstract readReview
In one paragraph

Review in International journal of environmental research and public health, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Wastewater-Based Surveillance of Antimicrobial Resistance in Niger: An Exploratory Study.The American journal of tropical medicine and hygiene · 2023
    Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Microorganisms · 2020
    Article
  12. Urbanization and Waterborne Pathogen Emergence in Low-Income Countries: Where and How to Conduct Surveys?International journal of environmental research and public health · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexandra BastaraudLaboratoire d'Hygiène des Aliments et de l'Environnement, Institut Pasteur de Madagascar, BP 1274, Antananarivo 101, Madagascar.
Philippe CecchiMARBEC (IRD, IFREMER, UM2 and CNRS), University Montpellier, 34095 Montpellier, France.ORCID 0000-0001-5562-6877
Pascal HandschumacherIRD UMR 912 SESSTIM, INSERM-IRD-Université de Marseille II, 13000 Marseille, France.
Mathias AltmannISPED Université Victor Segalen Bordeaux II, 146 rue Leo Saignat, 33076 Bordeaux cedex, France.
Ronan JambouDépartement de Parasitologie et des insectes vecteurs, Institut Pasteur Paris, 75015 Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A major forthcoming sanitary issue concerns the apparition and spreading of drug-resistant microorganisms, potentially threatening millions of humans. In low-income countries, polluted urban runoff and open sewage channels are major sources of microbes. These microbes join natural microbial communities in aquatic ecosystems already impacted by various chemicals, including antibiotics. These composite microbial communities must adapt to survive in such hostile conditions, sometimes promoting the selection of antibiotic-resistant microbial strains by gene transfer. The low probability of exchanges between planktonic microorganisms within the water column may be significantly improved if their contact was facilitated by particular meeting places. This could be specifically the case within biofilms that develop on the surface of the myriads of floating macroplastics increasingly polluting urban tropical surface waters. Moreover, as uncultivable bacterial strains could be involved, analyses of the microbial communities in their whole have to be performed. This means that new-omic technologies must be routinely implemented in low- and middle-income countries to detect the appearance of resistance genes in microbial ecosystems, especially when considering the new 'plastic context.' We summarize the related current knowledge in this short review paper to anticipate new strategies for monitoring and surveying microbial communities.

Indexed as

BiofilmsMicrobiotaUrbanizationWater MicrobiologyAnti-Bacterial AgentsBacteriaDeveloping CountriesEnvironmental MonitoringHumansPovertySewageSurveys and QuestionnairesAnti-Bacterial AgentsSewagedrug resistancemetagenomicplasticssurface waterurbanizationwaterborne diseases

Identifiers

PMID31940838
PMCPMC7013806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.