Evidence map›Paper›PMID 31940795›Full record

ArticleAnimals : an open access journal from MDPI2020

Identification of Novel lncRNAs Differentially Expressed in Placentas of Chinese Ningqiang Pony and Yili Horse Breeds.

Yabin Pu, Yanli Zhang, Tian Zhang, Jianlin Han, Yuehui Ma, Xuexue Liu

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. LncRNAs in domesticated animals: from dog to livestock species.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yabin PuInstitute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.
Yanli ZhangInstitute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.
Tian ZhangState Key Laboratory of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China.
Jianlin HanCAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources, Institute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.ORCID 0000-0002-1527-3963
Yuehui MaInstitute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.
Xuexue LiuInstitute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.ORCID 0000-0002-6871-2640
Chinese Academy of Agricultural Sciences · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

Agricultural Science and Technology Innovation Program of China ASTIP-IAS01Chinese Academy of Agricultural Sciences Y2017JC03, Y2018PT68International Postdoctoral Exchange Fellowship Program 20190102National Natural Science Foundation of China 31772553National Natural Science Foundation of China 31972530
6 · The paper itself

Abstract

As a nutrient sensor, the placenta plays a key role in regulating fetus growth and development. Long non-coding RNAs (lncRNAs) have been shown to regulate growth-related traits. However, the biological function of lncRNAs in horse placentas remains unclear. To compare the expression patterns of lncRNAs in the placentas of the Chinese Ningqiang (NQ) and Yili (YL) breeds, we performed a transcriptome analysis using RNA sequencing (RNA-seq) technology. NQ is a pony breed with an average adult height at the withers of less than 106 cm, whereas that of YL is around 148 cm. Based on 813 million high-quality reads and stringent quality control procedures, 3011 transcripts coding for 1464 placental lncRNAs were identified and mapped to the horse reference genome. We found 107 differentially expressed lncRNAs (DELs) between NQ and YL, including 68 up-regulated and 39 down-regulated DELs in YL. Six (

Indexed as

horselong non-coding RNAplacentaponyTBX3

Identifiers

PMID31940795
PMCPMC7022612
OpenAlexW2999393708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.