Evidence map›Paper›PMID 31940355›Full record

ArticlePloS one2020

The treeness of the tree of historical trees of life.

Marie Fisler, Cédric Crémière, Pierre Darlu, Guillaume Lecointre

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Marie FislerUMR 7205 CNRS-MNHN-SU-EPHE « Institut de Systématique, Evolution et Biodiversité », département « Origines & Évolution », Muséum National d'Histoire Naturelle, Paris, France.
Cédric CrémièreMusée d'Histoire Naturelle du Havre, Place du vieux marché, Le Havre, France.
Pierre DarluUMR 7206 CNRS-MNHN-UPD « Eco-anthropologie et Ethnobiologie », département « Hommes, Nature et Sociétés », Muséum National d'Histoire Naturelle, Paris, France.
Guillaume LecointreUMR 7205 CNRS-MNHN-SU-EPHE « Institut de Systématique, Evolution et Biodiversité », département « Origines & Évolution », Muséum National d'Histoire Naturelle, Paris, France.ORCID 0000-0001-7282-0516
Centre National de la Recherche Scientifique · FRUniversité Le Havre Normandie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This paper compares and categorizes historical ideas about trees showing relationships among biological entities. The hierarchical structure of a tree is used to test the global consistency of similarities among these ideas; in other words we assess the "treeness" of the tree of historical trees. The collected data are figures and ideas about trees showing relationships among biological entities published or drawn by naturalists from 1555 to 2012. They are coded into a matrix of 235 historical trees and 141 descriptive attributes. From the most parsimonious "tree" of historical trees, treeness is measured by consistency index, retention index and homoplasy excess ratio. This tree is used to create sets or categories of trees, or to study the circulation of ideas. From an unrooted network of historical trees, treeness is measured by the delta-score. This unrooted network is used to measure and visualize treeness. The two approaches show a rather good treeness of the data, with respectively a retention idex of 0.83 and homoplasy excess ratio of 0.74, on one hand, and a delta-score of 0.26 on the other hand. It is interpreted as due to vertical transmission, i.e. an inheritance of shared ideas about biological trees among authors. This tree of trees is then used to test categories previously made. For instance, cladists and gradists are « paraphyletic ». The branches of this tree of trees suggest new categories of tree-thinkers that could have been overlooked by historians or systematists.

Indexed as

Biological EvolutionPhylogenyComputer Graphics

Identifiers

PMID31940355
PMCPMC6961905
OpenAlexW2999323743

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.