Evidence map›Paper›PMID 31939189›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2020

Optogenetics: Rho GTPases Activated by Light in Living Macrophages.

Maren Hülsemann, Polina V Verkhusha, Peng Guo, Veronika Miskolci, Dianne Cox, Louis Hodgson

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maren HülsemannDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, USA.
Polina V VerkhushaDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, USA.
Peng GuoDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, USA.
Veronika MiskolciDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI, USA.
Dianne CoxDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, USA. dianne.cox@einsteinmed.org.
Louis HodgsonDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY, USA. louis.hodgson@einsteinmed.org.

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
TRAINING PROGRAM IN CELLULAR &MOLEC. BIOLOGY &GENETICST32GM007491 · NIGMS · YESHIVA UNIVERSITY · PI QUERY, CHARLES C · 1985 to 2021
$17.0M
Integration of RhoGTPase signaling during macrophage migrationR01GM129098 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HODGSON, LOUIS · 2018 to 2019
$655k
New biosensor tools for Diaphanous related formin mDia 1 and 2, useful for multiplex imagingR01GM132098 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI HODGSON, LOUIS · 2019 to 2020
$430k
NCI NIH HHS P30 CA013330NIGMS NIH HHS R01 GM129098NIGMS NIH HHS R01 GM132098NIGMS NIH HHS T32 GM007491
6 · The paper itself

Abstract

Genetically encoded optogenetic tools are increasingly popular and useful for perturbing signaling pathways with high spatial and temporal resolution in living cells. Here, we show basic procedures employed to implement optogenetics of Rho GTPases in a macrophage cell line. Methods described here are generally applicable to other genetically encoded optogenetic tools utilizing the blue-green spectrum of light for activation, designed for specific proteins and enzymatic targets important for immune cell functions.

Indexed as

LightOptogeneticsAnimalsCell LineDNA-Binding ProteinsEnzyme ActivationGene ExpressionGenes, ReporterMacrophagesMiceMicroscopy, FluorescenceProtein BindingRAW 264.7 Cellsrho GTP-Binding ProteinsTransfectionDNA-Binding Proteinsrho GTP-Binding ProteinsLOV2OptogeneticsPhotoactivatable proteinsRho GTPases

Identifiers

PMID31939189
PMCPMC7032845

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.