Evidence map›Paper›PMID 31938959›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2020

Molecular epidemiology of Shigella flexneri isolated from pediatrics in a diarrhea-endemic area of Khyber Pakhtunkhwa, Pakistan.

Iqbal Nisa, Muhammad Qasim, Arnold Driessen, Jeroen Nijland, Fazli Bari, Mohammad Haroon, Hazir Rahman, Nusrat Yasin, Taj Ali Khan, Mubbashir Hussain and 1 more

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In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Human vaccines & immunotherapeutics · 2026
    Review
  3. Article
  4. Article
  5. Prevalence and Antimicrobial-Resistant Features ofInterdisciplinary perspectives on infectious diseases · 2023
    Review
  6. Antimicrobial Susceptibility Patterns ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2023
    Article
  7. Article
  8. A Novel Bacteriocin AgainstFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Iqbal NisaDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan.
Muhammad QasimDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan. qasim89@gmail.com.
Arnold DriessenDepartment of Molecular Microbiology, Groningen Biomolecular Sciences, and Biotechnology Institute, Faculty of Science and Engineering, Rijksuniversiteit Groningen, Groningen, The Netherlands.
Jeroen NijlandDepartment of Molecular Microbiology, Groningen Biomolecular Sciences, and Biotechnology Institute, Faculty of Science and Engineering, Rijksuniversiteit Groningen, Groningen, The Netherlands.
Fazli BariDepartment of Pathology, Lady Reading Hospital, Peshawar, Pakistan.
Mohammad HaroonDepartment of Medicine, Khyber Teaching Hospital, Peshawar, Pakistan.
Hazir RahmanDepartment of Microbiology, Abdul Wali Khan University, Mardan, Pakistan.
Nusrat YasinDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan.
Taj Ali KhanDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan.
Mubbashir HussainDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan.
Waheed UllahDepartment of Microbiology, Kohat University of Science and Technology, Kohat, 26000, Pakistan.
Kohat University of Science and Technology · PKUniversity of Groningen · NLAbdul Wali Khan University Mardan · PKKhyber Teaching Hospital · PKNorthern University · PK

Funding

Higher Education Commision, Pakistan FTO number 0341-3970-2018
6 · The paper itself

Abstract

Shigella flexneri is considered as an important causative agent of Shigellosis causing diarrhea in the countries with a low socioeconomic status. No study has been carried out on the molecular prevalence of S. flexneri in Khyber Pakhtunkhwa, Pakistan. So this study was designed to evaluate the molecular prevalence of S. flexneri and their associated risk factors. A total of 2014 diarrheal stool samples were collected from January 2016 to May 2017 from pediatrics patients of Khyber Pakhtunkhwa followed by identification of S. flexneri through biochemical, serological, and molecular methods. The overall prevalence of Shigella species was found to be 7.9% (n = 160). The predominant Shigella specie was S. flexneri (n = 155, 96.8%) followed by S. boydii (n = 5, 3.1%). Interestingly, no sample was found positive for S. sonnei and S. dysenteriae. The majority of Shigellosis cases occurred from June to September. Potential risk factors related with Shigellosis were unhygienic latrine usage, bad hand washing, and consumption of unhygienic food and water, and pipe leakage in the sewage system. In this study, we have observed a high number of Shigellosis cases especially those caused by S. flexneri. It is suggested that effective health awareness programs should be organized by the regional health authorities to minimize the magnitude of pediatrics Shigellosis.

Indexed as

AdolescentChildChild, PreschoolDiarrheaDNA, BacterialDysentery, BacillaryFecesFemaleHumansHygieneInfantInfant, NewbornMalePakistanPrevalenceRisk FactorsDNA, BacterialDiarrheaEndemic areaMolecular epidemiologyPakistanPediatricsS. flexneri

Identifiers

PMID31938959
OpenAlexW3000448929

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.