Evidence map›Paper›PMID 31938128›Full record

ArticleInternational journal of clinical and experimental pathology2018

Genome-wide screening for genomic aberrations in Kazakh patients with esophageal squamous cell cancer by comparative genomic hybridization.

Xiao-Bin Cui, Yan-Xia Tian, Cai-Pu Chun, Hao Peng, Chun-Xia Liu, Lan Yang, Jian-Ming Hu, Hua-Hua Xin, Xi Chen, Ning Wang and 4 more

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Xiao-Bin CuiKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Yan-Xia TianKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Cai-Pu ChunDepartment of Pathology, Nongyishi Hospital Akesu, China.
Hao PengKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Chun-Xia LiuKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Lan YangKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Jian-Ming HuKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Hua-Hua XinKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Xi ChenKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Ning WangKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Yu-Tao WeiDepartment of Thoracic and Cardiovascular Surgery, The First Affiliated Hospital, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Lai-Bo YinDepartment of Thoracic and Cardiovascular Surgery, The First Affiliated Hospital, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Yun-Zhao ChenKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Feng LiKey Laboratory for Xinjiang Endemic and Ethnic Diseases, Department of Pathology, School of Medicine, Shihezi University Shihezi, Xinjiang, China.
Shihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiple chromosome aberrations are responsible for tumorigenesis of esophagus squamous cell carcinoma (ESCC). To characterize genetic alterations by comparative genomic hybridization (CGH) and their relation to ESCC, We enrolled 54 members with ESCC from Kazakh's patients. We found that the deletions of 3p (P = 0.032), 17p (P = 0.004), 22q (P = 0.000) and gains of 5p (P = 0.000), 11q (P = 0.000) were significantly correlated with the location of tumors. Losses of 1p (P = 0.005), 3p (P = 0.006), 22q (P = 0.024) and gains of 3q (P = 0.043), 8q (P = 0.038), 18q (P = 0.046) were also found more frequently in patients with larger diameter disease. The loss of 19q (P = 0.005) and gains of l3q (P = 0.045), 18p (P = 0.018) were significantly correlated with pathologic grade. The gain of 7p (P = 0.009) and deletion of 19q (P = 0.018) were seen more frequently in patients with Grade III-IV tumors. Chromosome amplifications in ESCC at 1q (P = 0.008), 7p (P = 0.008), 8q (P = 0.018) and deletions at 3p (P = 0.021), 11q (P = 0.002), 17p (P = 0.012) were related to lymph node metastasis; the gains of 1q (P = 0.026) and 6q (P = 0.017) and the loss of 11q (P = 0.001) were significant in different isoforms of HPV infection. We identified some chromosomes in which the genes were related to the tumorgenesis of ESCC, which may be a theme for future investigation.

Indexed as

Chromosomal aberrationcomparative genomic hybridizationesophagus squamous cell carcinomaHPV infectionXinjiang Kazakh

Identifiers

PMID31938128
PMCPMC6957937
OpenAlexW3027199845

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.