Evidence map›Paper›PMID 31937890›Full record

ArticleScientific reports2020

Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs.

Victor Adriano Okstoft Carmelo, Priyanka Banerjee, Wellison Jarles da Silva Diniz, Haja N Kadarmideen

Abstract read
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Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Victor Adriano Okstoft CarmeloQuantitative Genomics, Bioinformatics and Computational Biology, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark.
Priyanka BanerjeeQuantitative Genomics, Bioinformatics and Computational Biology, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark.
Wellison Jarles da Silva DinizQuantitative Genomics, Bioinformatics and Computational Biology, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0003-1082-5535
Haja N KadarmideenQuantitative Genomics, Bioinformatics and Computational Biology, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark. hajak@dtu.dk.ORCID http://orcid.org/0000-0001-6294-382X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Improving feed efficiency (FE) is a major goal of pig breeding, reducing production costs and providing sustainability to the pig industry. Reliable predictors for FE could assist pig producers. We carried out untargeted blood metabolite profiling in uncastrated males from Danbred Duroc (n = 59) and Danbred Landrace (n = 50) pigs at the beginning and end of a FE testing phase to identify biomarkers and biological processes underlying FE and related traits. By applying linear modeling and clustering analyses coupled with WGCNA framework, we identified 102 and 73 relevant metabolites in Duroc and Landrace based on two sampling time points. Among them, choline and pyridoxamine were hub metabolites in Duroc in early testing phase, while, acetoacetate, cholesterol sulfate, xanthine, and deoxyuridine were identified in the end of testing. In Landrace, cholesterol sulfate, thiamine, L-methionine, chenodeoxycholate were identified at early testing phase, while, D-glutamate, pyridoxamine, deoxycytidine, and L-2-aminoadipate were found at the end of testing. Validation of these results in larger populations could establish FE prediction using metabolomics biomarkers. We conclude that it is possible to identify a link between blood metabolite profiles and FE. These results could lead to improved nutrient utilization, reduced production costs, and increased FE.

Indexed as

Animal FeedMetabolic Networks and PathwaysAnimalsLinear ModelsMetabolomicsSwine

Identifiers

PMID31937890
PMCPMC6959238

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.