Evidence map›Paper›PMID 31937756›Full record

ArticleNature communications2020

Environmental DNA reveals seasonal shifts and potential interactions in a marine community.

Anni Djurhuus, Collin J Closek, Ryan P Kelly, Kathleen J Pitz, Reiko P Michisaki, Hilary A Starks, Kristine R Walz, Elizabeth A Andruszkiewicz, Emily Olesin, Katherine Hubbard and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 1 pooled it
31.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 1 synthesis or guideline pooled it, 314 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
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  5. Fish diversity and community turnover across protection zones in multiuse marine protected areas.Conservation biology : the journal of the Society for Conservation Biology · 2026
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Anni DjurhuusUniversity of South Florida, College of Marine Science, 140 7th Avenue South, St. Petersburg, FL, 33701, USA. anni.djurhuus@gmail.com.ORCID http://orcid.org/0000-0002-3517-7522
Collin J ClosekStanford Center for Ocean Solutions, Stanford University, 473 Via Ortega, Stanford, CA, 94305, USA. closek@gmail.com.ORCID http://orcid.org/0000-0003-4431-221X
Ryan P KellyUniversity of Washington, School of Marine and Environmental Affairs, 3707 Brooklyn Ave, Seattle, WA, 98105, USA.
Kathleen J PitzMonterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA, 95039, USA.ORCID http://orcid.org/0000-0002-4931-8592
Reiko P MichisakiMonterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA, 95039, USA.
Hilary A StarksStanford Center for Ocean Solutions, Stanford University, 473 Via Ortega, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-1418-6331
Kristine R WalzMonterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA, 95039, USA.
Elizabeth A AndruszkiewiczDepartment of Civil and Environmental Engineering, Stanford University, 473 Via Ortega, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-9675-0003
Emily OlesinFlorida Fish and Wildlife Research Conservation-Fish and Wildlife Research Institute, 100 8th Avenue SE, St. Petersburg, FL, 33701, USA.
Katherine HubbardFlorida Fish and Wildlife Research Conservation-Fish and Wildlife Research Institute, 100 8th Avenue SE, St. Petersburg, FL, 33701, USA.
Enrique MontesUniversity of South Florida, College of Marine Science, 140 7th Avenue South, St. Petersburg, FL, 33701, USA.ORCID http://orcid.org/0000-0002-3103-4479
Daniel OtisUniversity of South Florida, College of Marine Science, 140 7th Avenue South, St. Petersburg, FL, 33701, USA.ORCID http://orcid.org/0000-0001-6049-7475
Frank E Muller-KargerUniversity of South Florida, College of Marine Science, 140 7th Avenue South, St. Petersburg, FL, 33701, USA.ORCID http://orcid.org/0000-0003-3159-5011
Francisco P ChavezMonterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA, 95039, USA.ORCID http://orcid.org/0000-0002-0691-292X
Alexandria B BoehmDepartment of Civil and Environmental Engineering, Stanford University, 473 Via Ortega, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-8162-5090
Mya BreitbartUniversity of South Florida, College of Marine Science, 140 7th Avenue South, St. Petersburg, FL, 33701, USA. mya@usf.edu.ORCID http://orcid.org/0000-0003-3210-2899
University of South Florida St. Petersburg · USMonterey Bay Aquarium Research Institute · USStanford University · USFlorida Fish and Wildlife Conservation Commission · USUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Environmental DNA (eDNA) analysis allows the simultaneous examination of organisms across multiple trophic levels and domains of life, providing critical information about the complex biotic interactions related to ecosystem change. Here we used multilocus amplicon sequencing of eDNA to survey biodiversity from an eighteen-month (2015-2016) time-series of seawater samples from Monterey Bay, California. The resulting dataset encompasses 663 taxonomic groups (at Family or higher taxonomic rank) ranging from microorganisms to mammals. We inferred changes in the composition of communities, revealing putative interactions among taxa and identifying correlations between these communities and environmental properties over time. Community network analysis provided evidence of expected predator-prey relationships, trophic linkages, and seasonal shifts across all domains of life. We conclude that eDNA-based analyses can provide detailed information about marine ecosystem dynamics and identify sensitive biological indicators that can suggest ecosystem changes and inform conservation strategies.

Indexed as

BiodiversitySeawaterCaliforniaCluster AnalysisDNA Barcoding, TaxonomicDNA, EnvironmentalEcosystemEnvironmental MonitoringFood ChainMarine BiologySeasonsTime FactorsDNA, Environmental

Identifiers

PMID31937756
PMCPMC6959347
OpenAlexW3000176746

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.