Evidence map›Paper›PMID 31934023›Full record

ArticleInternational journal of clinical and experimental pathology2019

Prognostic value of epithelial-mesenchymal transition related genes: SLUG and QKI in breast cancer patients.

Siwen Gu, Chengyu Chu, Wanna Chen, Hong Ren, Yun Cao, Xiaoyan Li, Jing He, Yiwei Wang, Yiting Jin, Xiuping Liu and 1 more

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In one paragraph

Article in International journal of clinical and experimental pathology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Siwen GuDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Chengyu ChuDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Wanna ChenDepartment of General Surgery, The First Affiliated Hospital, Sun Yat-san University Guangzhou, China.
Hong RenDepartment of General Surgery, Qingdao Municipal Hospital Qingdao, Shandong Province, China.
Yun CaoDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Xiaoyan LiDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Jing HeDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Yiwei WangDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Yiting JinDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Xiuping LiuDepartment of Pathology, The Fifth People's Hospital of Shanghai, Fudan University Shanghai, China.
Qiang ZouDepartment of General Surgery, Huashan Hospital, Fudan University Shanghai, China.
Huashan Hospital · CNQingdao University · CNShanghai Medical College of Fudan University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Snail family zinc finger 2 (SLUG) is related to epithelial-mesenchymal transition (EMT). Quaking (QKI) is an RNA binding protein and has been indicated to have a relationship with EMT by recent studies. The prognostic value of SLUG and QKI in breast cancer patients still needs exploration. We conducted Immunohistochemistry (IHC) to evaluate the protein expression of SLUG and QKI and the prognostic value in 108 breast cancer (BC) patients. The Bc-GenExMiner database was used to compare the mRNA levels of two genes in different subgroups of BC patients. Kaplan-Meier plotter were used for survival data of SLUG and QKI gene. We also mined the cBioPortal database for co-expression analysis of QKI and EMT markers. Our results suggested that patients with higher expression of SLUG and QKI showed shorter overall survival time. The mRNA level of SLUG and QKI were higher in ER negative, PR negative, ≤ 51 y, and TNBC patients. SLUG mRNA showed no survival significance, while higher QKI mRNA expression level was correlated with worse clinical outcome in Kaplan-Meier Plotter database. The cBioPortal database showed that QKI was correlated to SLUG as well as other EMT markers like TWIST2, VIM, and ZEB2. QKI was indicated to be a potential prognostic marker for BC patients, and combined expression of SLUG and QKI showed the best prognostic value. Co-expression analysis indicated that QKI was likely to have a correlation with SLUG and EMT.

Indexed as

breast cancerEMTprognosisQKISLUG

Identifiers

PMID31934023
PMCPMC6949612
OpenAlexW3007713414

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.