Evidence map›Paper›PMID 31933260›Full record

ArticleMolecular biology reports2020

Characterization of a novel cotton MYB gene, GhMYB108-like responsive to abiotic stresses.

Abid Ullah, Muhammad Tahir Ul Qamar, Mohammad Nisar, Ali Hazrat, Gul Rahim, Aamir Hamid Khan, Kashif Hayat, Saeed Ahmed, Waqar Ali, Aziz Khan and 1 more

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Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Article
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  7. Review
  8. R2R3 MYB transcription factor SbMYBHv33 negatively regulates sorghum biomass accumulation and salt tolerance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  9. Article
  10. Genome-wide association study reveals that GhTRL1 and GhPIN8 affect cotton root development.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Systematic analysis of differentially expressedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  16. Genome-wide analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  17. Review
  18. Frontiers in plant science · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Abid UllahNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China. abid.ullah@uom.edu.pk.ORCID http://orcid.org/0000-0003-2389-3916
Muhammad Tahir Ul QamarNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Mohammad NisarDepartment of Botany, University of Malakand, Chakdara Dir Lower, 18800, Khyber Pakhtunkhwa, Pakistan.
Ali HazratDepartment of Botany, University of Malakand, Chakdara Dir Lower, 18800, Khyber Pakhtunkhwa, Pakistan.
Gul RahimDepartment of Botany, University of Malakand, Chakdara Dir Lower, 18800, Khyber Pakhtunkhwa, Pakistan.
Aamir Hamid KhanNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Kashif HayatKey Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China.
Saeed AhmedDepartment of Zoology, University of Malakand, Chakdara Dir Lower, 18800, Khyber Pakhtunkhwa, Pakistan.
Waqar AliDepartment of Biotechnology, University of Malakand, Chakdara Dir Lower, 18800, Khyber Pakhtunkhwa, Pakistan.
Aziz KhanKey Laboratory of Plant Genetic and Breeding, College of Agriculture, Guanxi University, Nanning, 530005, Guanxi, China.
Xiyan YangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China. yxy@mail.hzau.edu.cn.
University of Malakand · PKHuazhong Agricultural University · CNGuangxi University · CNShanghai Jiao Tong University · CN

Funding

National Basic Research Program of China (973 Program) 2016YFD0101006
6 · The paper itself

Abstract

Transcriptional factors are the major regulators of plant signaling pathways in response to environmental stresses i.e., drought, salinity and cold. Hereby, the GhMYB108-like was characterized to determine whether it regulate these stresses. The GhMYB108-like cDNA consisted of 1107 base pairs (bp) with 807 open reading frame encoded a protein of 268 amino acids. Its isoelectric point and molecular weight are 5.51 and 30.3 kDa respectively. Phylogenetic analysis and online databases revealed that GhMYB108-like proteins are closely related with the Arabidopsis thaliana MYB2. Important cis-elements were detected in the promotor region of GhMYB108-like responding to stresses and phytohormones. The 3D structure of GhMYB108-like protein has been predicted. In addition, various physico-chemical properties of GhMYB108-like have been determined. Subcellular localization confirmed that GhMYB108-like are nuclear localized protein. Quantitative expression analysis showed that polyethylene glycol and salt treatments significantly induced the expression of GhMYB108-like. Overall, our findings suggest that GhMYB108-like is an important gene that would plays important regulatory role in response to drought and salt stresses.

Indexed as

Stress, PhysiologicalAmino Acid SequenceBase SequenceDroughtsGene Expression Regulation, PlantGossypiumPhylogenyPhytochromePlant ProteinsPlants, Genetically ModifiedProto-Oncogene Proteins c-mybRegulatory Elements, TranscriptionalSalinitySequence Homology, Amino AcidSodium ChloridePhytochromePlant ProteinsProto-Oncogene Proteins c-mybSodium ChlorideBioinformaticsCottonDroughtGhMYB108-likeSalinity

Identifiers

PMID31933260
OpenAlexW2999770882

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.