Evidence map›Paper›PMID 31931885›Full record

ArticleParasites & vectors2020

Gene copy number and function of the APL1 immune factor changed during Anopheles evolution.

Christian Mitri, Emmanuel Bischoff, Karin Eiglmeier, Inge Holm, Constentin Dieme, Emma Brito-Fravallo, Abbasali Raz, Sedigheh Zakeri, Mahdokht I K Nejad, Navid D Djadid and 2 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Christian MitriUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Emmanuel BischoffUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Karin EiglmeierUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Inge HolmUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Constentin DiemeUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Emma Brito-FravalloUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Abbasali RazMalaria and Vector Research Group, Biotechnology Research Center, Institut Pasteur of Iran, Tehran, Iran.
Sedigheh ZakeriMalaria and Vector Research Group, Biotechnology Research Center, Institut Pasteur of Iran, Tehran, Iran.
Mahdokht I K NejadMalaria and Vector Research Group, Biotechnology Research Center, Institut Pasteur of Iran, Tehran, Iran.
Navid D DjadidMalaria and Vector Research Group, Biotechnology Research Center, Institut Pasteur of Iran, Tehran, Iran.
Kenneth D VernickUnit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France. kenneth.vernick@pasteur.fr.
Michelle M RiehleDepartment of Microbiology and Immunology, Medical College of Wisconsin, Milwaukee, WI, USA. mriehle@mcw.edu.
Institut Pasteur · FRCentre National de la Recherche Scientifique · FRBiotechnology Research Center · IRPasteur Institute of Iran · IRMedical College of Wisconsin · US

Funding

Gene enhancer mapping technology in AnophelesR21AI121587 · NIAID · UNIVERSITY OF MINNESOTA · PI RIEHLE, MICHELLE M · 2016 to 2017
$421k
Agence Nationale de la Recherche ANR-19-CE35-0004European Commission Infravec2-731060H2020 European Research Council AnoPath-323173LABoratoires d'EXcellence IBEID (FR) ANR-10-LABX-62-IBEIDNational Institute of Allergy and Infectious Diseases AI121587NIAID NIH HHS R21 AI121587
6 · The paper itself

Abstract

backgroundThe recent reference genome assembly and annotation of the Asian malaria vector Anopheles stephensi detected only one gene encoding the leucine-rich repeat immune factor APL1, while in the Anopheles gambiae and sibling Anopheles coluzzii, APL1 factors are encoded by a family of three paralogs. The phylogeny and biological function of the unique APL1 gene in An. stephensi have not yet been specifically examined.

methodsThe APL1 locus was manually annotated to confirm the computationally predicted single APL1 gene in An. stephensi. APL1 evolution within Anopheles was explored by phylogenomic analysis. The single or paralogous APL1 genes were silenced in An. stephensi and An. coluzzii, respectively, followed by mosquito survival analysis, experimental infection with Plasmodium and expression analysis.

resultsAPL1 is present as a single ancestral gene in most Anopheles including An. stephensi but has expanded to three paralogs in an African lineage that includes only the Anopheles gambiae species complex and Anopheles christyi. Silencing of the unique APL1 copy in An. stephensi results in significant mosquito mortality. Elevated mortality of APL1-depleted An. stephensi is rescued by antibiotic treatment, suggesting that pathology due to bacteria is the cause of mortality, and indicating that the unique APL1 gene is essential for host survival. Successful Plasmodium development in An. stephensi depends upon APL1 activity for protection from high host mortality due to bacteria. In contrast, silencing of all three APL1 paralogs in An. coluzzii does not result in elevated mortality, either with or without Plasmodium infection. Expression of the single An. stephensi APL1 gene is regulated by both the Imd and Toll immune pathways, while the two signaling pathways regulate different APL1 paralogs in the expanded APL1 locus.

conclusionsAPL1 underwent loss and gain of functions concomitant with expansion from a single ancestral gene to three paralogs in one lineage of African Anopheles. We infer that activity of the unique APL1 gene promotes longevity in An. stephensi by conferring protection from or tolerance to an effect of bacterial pathology. The evolution of an expanded APL1 gene family could be a factor contributing to the exceptional levels of malaria transmission mediated by human-feeding members of the An. gambiae species complex in Africa.

Indexed as

AnimalsAnophelesChaperonin 60Evolution, MolecularGene DosageImmunologic FactorsInsect ProteinsInsect VectorsLongevityMalariaPeptide FragmentsPhylogenyAPL-1 peptideChaperonin 60Immunologic FactorsInsect ProteinsPeptide FragmentsGene essentialityGene familyGene neofunctionalizationInsect immunityMosquito

Identifiers

PMID31931885
PMCPMC6958605
OpenAlexW2998775069

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.