Evidence map›Paper›PMID 31930594›Full record

ArticleProtein science : a publication of the Protein Society2020

Allosteric inhibitors of Mycobacterium tuberculosis tryptophan synthase.

Karolina Michalska, Changsoo Chang, Natalia I Maltseva, Robert Jedrzejczak, Gregory T Robertson, Fabian Gusovsky, Patrick McCarren, Stuart L Schreiber, Partha P Nag, Andrzej Joachimiak

Open access · greenAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  8. MedComm · 2023
    Review
  9. Article
  10. Discovery of antimicrobial agent targeting tryptophan synthase.Protein science : a publication of the Protein Society · 2022
    Article
  11. Atomic-resolution chemical characterization of (2x)72-kDa tryptophan synthase via four- and five-dimensionalProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Review
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Karolina MichalskaCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Changsoo ChangCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Natalia I MaltsevaCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Robert JedrzejczakCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Gregory T RobertsonColorado State University, Mycobacteria Research Laboratories, Department of Microbiology, Immunology and Pathology, Fort Collins, Colorado.
Fabian GusovskyEisai Co, Ltd., World Health Initiative, Andover, Massachusetts.
Patrick McCarrenBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Stuart L SchreiberBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Partha P NagBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Andrzej JoachimiakCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.ORCID 0000-0003-2535-6209
Argonne National Laboratory · USBroad Institute · USColorado State University · USWorld Health Organization - Pakistan · PK

Funding

The Midwest Center for Structural Genomics - Community ResourceR24GM115586 · NIGMS · UNIVERSITY OF CHICAGO · PI JOACHIMIAK, ANDRZEJ · 2015 to 2017
$2.8M
NIAID NIH HHS HHSN272201200026CNIAID NIH HHS HHSN272201700060CNIGMS NIH HHS R24 GM115586NIH HHS GM115586NIH HHS HHSN272201200026CNIH HHS HHSN272201700060C
6 · The paper itself

Abstract

Global dispersion of multidrug resistant bacteria is very common and evolution of antibiotic-resistance is occurring at an alarming rate, presenting a formidable challenge for humanity. The development of new therapeuthics with novel molecular targets is urgently needed. Current drugs primarily affect protein, nucleic acid, and cell wall synthesis. Metabolic pathways, including those involved in amino acid biosynthesis, have recently sparked interest in the drug discovery community as potential reservoirs of such novel targets. Tryptophan biosynthesis, utilized by bacteria but absent in humans, represents one of the currently studied processes with a therapeutic focus. It has been shown that tryptophan synthase (TrpAB) is required for survival of Mycobacterium tuberculosis in macrophages and for evading host defense, and therefore is a promising drug target. Here we present crystal structures of TrpAB with two allosteric inhibitors of M. tuberculosis tryptophan synthase that belong to sulfolane and indole-5-sulfonamide chemical scaffolds. We compare our results with previously reported structural and biochemical studies of another, azetidine-containing M. tuberculosis tryptophan synthase inhibitor. This work shows how structurally distinct ligands can occupy the same allosteric site and make specific interactions. It also highlights the potential benefit of targeting more variable allosteric sites of important metabolic enzymes.

Indexed as

Allosteric SiteCrystallography, X-RayEnzyme InhibitorsHumansIndolesLigandsModels, MolecularMolecular StructureMycobacterium tuberculosisSulfonamidesThiophenesTryptophan SynthaseEnzyme InhibitorsIndolesLigandssulfolaneSulfonamidesThiophenesTryptophan Synthaseallosteric regulationcatalysiscrystal structureenzyme inhibitorMycobacterium tuberculosistryptophantryptophan synthasetuberculosis

Identifiers

PMID31930594
PMCPMC7020977
OpenAlexW3000647573

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.