Evidence map›Paper›PMID 31930433›Full record

ArticleJournal of assisted reproduction and genetics2020

PFA is superior to glyoxal in preserving oocyte, embryo, and stem cell proteins evidenced by super-resolution microscopical surveys of epitopes.

Ferda Topal Celikkan, Ceren Mungan, Merve Sucu, Fatma Uysal, Selda Kahveci Hayme, Serhat Hayme, Nilay Kuscu, Sinan Ozkavukcu, Ciler Celik-Ozenci, Alp Can

Open access · bronzeAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ferda Topal CelikkanDepartment of Histology and Embryology, Laboratory for Stem Cells and Reproductive Cell Biology, Ankara University School of Medicine, 06410, Ankara, Turkey.
Ceren MunganAnkara University Biotechnology Institute, 06560, Ankara, Turkey.
Merve SucuAnkara University Biotechnology Institute, 06560, Ankara, Turkey.
Fatma UysalDepartment of Histology and Embryology, Laboratory for Stem Cells and Reproductive Cell Biology, Ankara University School of Medicine, 06410, Ankara, Turkey.
Selda Kahveci HaymeDepartment of Histology and Embryology, Laboratory for Stem Cells and Reproductive Cell Biology, Ankara University School of Medicine, 06410, Ankara, Turkey.
Serhat HaymeDepartment of Biostatistics, Ankara University School of Medicine, 06410, Ankara, Turkey.
Nilay KuscuDepartment of Histology and Embryology, Akdeniz University School of Medicine, 07070, Antalya, Turkey.
Sinan OzkavukcuDepartment of Histology and Embryology, Laboratory for Stem Cells and Reproductive Cell Biology, Ankara University School of Medicine, 06410, Ankara, Turkey.
Ciler Celik-OzenciDepartment of Histology and Embryology, Akdeniz University School of Medicine, 07070, Antalya, Turkey.
Alp CanDepartment of Histology and Embryology, Laboratory for Stem Cells and Reproductive Cell Biology, Ankara University School of Medicine, 06410, Ankara, Turkey. alpcan@medicine.ankara.edu.tr.ORCID http://orcid.org/0000-0002-5393-6115
Ankara University · TRAkdeniz University · TR

Funding

Ankara Universitesi 17A0230001
6 · The paper itself

Abstract

purposeChemical fixation is a critical step to retaining cellular targets as naturally as possible. Recent developments in microscopy allow sophisticated detection and measuring techniques with which spatio-temporal molecular alterations are conceivable. In this study, we compare two members of aldehyde fixatives [i.e., glyoxal (Gly) and paraformaldehyde (PFA)] to determine whether Gly, a less toxic dialdehyde fixative that is considered to retain immunoreactivity could provide a successful and consistent cell fixation in favor of PFA in various cell preparations and types.

methodsWe document the fixation competence of Gly and PFA side-by-side (with or without Triton X-100 permeabilization) in live- and fixed-cell preparations in mouse oocytes, embryos, and human somatic cells (human umbilical cord-derived mesenchymal stromal cells) using protein quantification by Western blot assay and super-resolution microscopy.

resultsAlthough Gly seemed to act faster than PFA, catastrophic consequences were found not acceptable, especially in oocytes and embryos. Due to cell lysate and immunocytochemistry surveys, it was obvious that PFA is superior to Gly in retaining cellular proteins in situ with little/no background staining. In many samples, PFA revealed more reliable and consistent results regarding the protein quantity and cellular localization corresponding to previously defined patterns in the literature.

conclusionAlthough the use of Gly is beneficial as indicated by previous reports, we concluded that it does not meet the requirement for proper fixation, at least for the tested cell types and proteins. However, PFA alone with no addition of TX displayed a significant cytoplasmic loss by generating membrane blebs during fixation.

Indexed as

ImmunohistochemistryAnimalsEmbryo, MammalianEpitopesFemaleFixativesFormaldehydeGlyoxalHumansMiceOocytesPolymersStem CellsEpitopesFixativesFormaldehydeGlyoxalparaformPolymersAldehyde fixativeEmbryoFixationGlyoxalOocyteParaformaldehyde

Identifiers

PMID31930433
PMCPMC7056772
OpenAlexW3000226904

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.