Evidence map›Paper›PMID 31929782›Full record

ArticleFrontiers in plant science2019

Transcriptome and Phytochemical Analyses Provide New Insights Into Long Non-Coding RNAs Modulating Characteristic Secondary Metabolites of Oolong Tea (

Chen Zhu, Shuting Zhang, Haifeng Fu, Chengzhe Zhou, Lan Chen, Xiaozhen Li, Yuling Lin, Zhongxiong Lai, Yuqiong Guo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 119 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chen ZhuCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Shuting ZhangCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Haifeng FuCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Chengzhe ZhouCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Lan ChenCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Xiaozhen LiCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Yuling LinCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Zhongxiong LaiCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Yuqiong GuoCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China.
Fujian Agriculture and Forestry University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oolong tea is a popular and semi-fermented beverage. During the processing of tea leaves, withering is the first indispensable process for improving flavor. However, the roles of long non-coding RNAs (lncRNAs) and the characteristic secondary metabolites during the withering of oolong tea leaves remain unknown. In this study, phytochemical analyses indicated that total polyphenols, flavonoids, catechins, epigallocatechin (EGC), catechin gallate (CG), gallocatechin gallate (GCG), epicatechin gallate (ECG), and epigallocatechin gallate (EGCG) were all less abundant in the solar-withered leaves (SW) than in the fresh leaves (FL) and indoor-withered leaves (IW). In contrast, terpenoid, jasmonic acid (JA), and methyl jasmonate (MeJA) contents were higher in the SW than in the FL and IW. By analyzing the transcriptome data, we detected 32,036 lncRNAs. On the basis of the Kyoto Encyclopedia of Genes and Genomes analysis, the flavonoid metabolic pathway, the terpenoid metabolic pathway, and the JA/MeJA biosynthesis and signal transduction pathway were enriched pathways. Additionally, 63 differentially expressed lncRNAs (DE-lncRNAs) and 23 target genes were identified related to the three pathways. A comparison of the expression profiles of the DE-lncRNAs and their target genes between the SW and IW revealed four up-regulated genes (

Indexed as

Camellia sinensislong non-coding RNAssecondary metabolitestranscriptomewithering

Identifiers

PMID31929782
PMCPMC6941427
OpenAlexW2998319886

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.