Evidence map›Paper›PMID 31927557›Full record

ArticleMedical science monitor : international medical journal of experimental and clinical research2020

Inhibition of Splicing Factor 3b Subunit 1 (SF3B1) Reduced Cell Proliferation, Induced Apoptosis and Resulted in Cell Cycle Arrest by Regulating Homeobox A10 (HOXA10) Splicing in AGS and MKN28 Human Gastric Cancer Cells.

Yan Zhang, Zhen Yuan, Yannan Jiang, Renbin Shen, Menghui Gu, Wei Xu, Xinhua Gu

Open access · hybridAbstract read
In one paragraph

Article in Medical science monitor : international medical journal of experimental and clinical research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
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  9. Article
  10. Alternative splicing of lncRNAs in human diseases.American journal of cancer research · 2021
    Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yan ZhangDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Zhen YuanDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Yannan JiangDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Renbin ShenDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Menghui GuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Wei XuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Xinhua GuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Nanjing Medical University, Suzhou, Jiangsu, China (mainland).
Nanjing Medical University · CNSuzhou Municipal Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Small nuclear ribonucleoproteins (snRNPs) complexes of protein and noncoding RNA accumulate in the cell nucleus and catalyze pre-mRNA splicing to form the spliceosome. This study aimed to investigate the role of the spliceosome, splicing factor 3b subunit 1 (SF3B1), in AGS and MKN28 human gastric cancer cells in vitro, including gene knockdown with small interfering RNA (siRNA), and the use of the selective mRNA splicing inhibitor of SF3B1, pladienolide B. MATERIAL AND METHODS In AGS and MKN28 human gastric cancer cells, SF3B1expression was inhibited with siRNA and pladienolide B. Following SF3B1 inhibition, the Cell Counting Kit-8 (CCK-8) assay measured cell proliferation, and flow cytometry was used to investigate cell apoptosis and cell cycle arrest. The downstream HOXA10 and AKT pathways were studied by quantitative reverse transcription-polymerase chain reaction (qRT-PCR) and Western blot. The presence of alternative splicing, or differential splicing, of single-gene coding for multiple proteins, was analyzed using The Cancer Genome Atlas (TCGA) SpliceSeq. RESULTS Inhibition of SF3B1 reduced the proliferation rate of AGS and MKN28 human gastric cancer cells by inducing apoptosis and G2/M phase arrest. SF3B1 knockdown resulted in reduced homeobox A10 (HOXA10) mRNA expression and expression of long noncoding RNA (lncRNA) isoforms of HOXA10 (exons 1 and 3) and HOXA10 (exons 2 and 3). SF3B1 inhibition increased PTEN levels and reduced AKT protein phosphorylation. CONCLUSIONS In AGS and MKN28 human gastric cancer cells in vitro, inhibition of SF3B1 reduced cell proliferation, induced apoptosis, and resulted in cell cycle arrest by regulating HOXA10 splicing.

Indexed as

ApoptosisCell Cycle CheckpointsAlternative SplicingCell Line, TumorCell ProliferationCell SurvivalEpoxy CompoundsExonsGene Expression Regulation, NeoplasticHomeobox A10 ProteinsHumansMacrolidesPhosphoproteinsRNA, Long NoncodingRNA, MessengerRNA Splicing FactorsEpoxy CompoundsHomeobox A10 ProteinsHOXA10 protein, humanMacrolidesPhosphoproteinspladienolide BRNA, Long NoncodingRNA, MessengerRNA Splicing FactorsSF3B1 protein, human

Identifiers

PMID31927557
PMCPMC6977614
OpenAlexW3000734686

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.