ArticleThe Journal of eukaryotic microbiology2020
Transcriptome Analysis Identifies Plasmodiophora brassicae Secondary Infection Effector Candidates.
Article in The Journal of eukaryotic microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed, 62 citations in OpenAlex.
- Microbe Profile:Microbiology (Reading, England) · 2026Review
- Candidate avirulent effector protein 2565 reduces clubroot incidence via rhizosphere microbiome restructuring and root exudate modulation.Frontiers in microbiology · 2025Article
- Comprehensive review ofFrontiers in microbiology · 2025Review
- Comprehensive Genomic and Proteomic Analysis Identifies Effectors ofJournal of fungi (Basel, Switzerland) · 2024Article
- Identification and Characterization of High-Molecular-Weight Proteins Secreted byJournal of fungi (Basel, Switzerland) · 2024Article
- Local endoreduplication of the host is a conserved process during Phytomyxea-host interaction.Frontiers in microbiology · 2024Article
- Overexpression of chitinaseVirulence · 2023Article
- Phagocytosis underpins the biotrophic lifestyle of intracellular parasites in the class Phytomyxea (Rhizaria).The New phytologist · 2023Article
- The clubroot pathogen Plasmodiophora brassicae: A profile update.Molecular plant pathology · 2023Review
- Advances in Biological Control and Resistance Genes of Brassicaceae Clubroot Disease-The Study Case of China.International journal of molecular sciences · 2023Review
- Characterization of a virulence factor in Plasmodiophora brassicae, with molecular markers for identification.PloS one · 2023Article
- Efficacy ofFrontiers in microbiology · 2023Article
- Transcriptome Analysis of Fusarium-Tomato Interaction Based on an Updated Genome Annotation ofJournal of fungi (Basel, Switzerland) · 2022Article
- What Can We Learn from -Omics Approaches to Understand Clubroot Disease?International journal of molecular sciences · 2022Review
- Comparing the infection biology and gene expression differences ofFrontiers in microbiology · 2022Article
- Identification and characterization of putative effectors fromFrontiers in plant science · 2022Article
- A clubroot pathogen effector targets cruciferous cysteine proteases to suppress plant immunity.Virulence · 2021Article
- SnRK1.1-mediated resistance of Arabidopsis thaliana to clubroot disease is inhibited by the novel Plasmodiophora brassicae effector PBZF1.Molecular plant pathology · 2021Article
- Molecular Pathotyping ofPathogens (Basel, Switzerland) · 2021Review
- Histopathology of theFrontiers in plant science · 2021Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plasmodiophora brassicae (Wor.) is an obligate intracellular plant pathogen affecting Brassicas worldwide. Identification of effector proteins is key to understanding the interaction between P. brassicae and its susceptible host plants. To date, there is very little information available on putative effector proteins secreted by P. brassicae during a secondary infection of susceptible host plants, resulting in root gall production. A bioinformatics pipeline approach to RNA-Seq data from Arabidopsis thaliana (L.) Heynh. root tissues at 17, 20, and 24 d postinoculation (dpi) identified 32 small secreted P. brassicae proteins (SSPbPs) that were highly expressed over this secondary infection time frame. Functional signal peptides were confirmed for 31 of the SSPbPs, supporting the accuracy of the pipeline designed to identify secreted proteins. Expression profiles at 0, 2, 5, 7, 14, 21, and 28 dpi verified the involvement of some of the SSPbPs in secondary infection. For seven of the SSPbPs, a functional domain was identified using Blast2GO and 3D structure analysis and domain functionality was confirmed for SSPbP22, a kinase localized to the cytoplasm and nucleus.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.