ArticleMolecular ecology resources2020
Applying genomic data in wildlife monitoring: Development guidelines for genotyping degraded samples with reduced single nucleotide polymorphism panels.
Article in Molecular ecology resources, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.
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Who cites it
37 citing papers in PubMed, 1 synthesis or guideline pooled it.
- A macrogenetic analysis of isolation mechanisms shaping genetic divergence in mammals.The Journal of heredity · 2026Pooled it
- High-Density SNP Genotyping Reveals High Population Connectivity and Limited Spatial Genetic Structure inEcology and evolution · 2026Article
- Leveraging Next-Generation Tools for Genetic Assessment and Demographic Monitoring in Threatened and Elusive Humboldt Martens.Evolutionary applications · 2026Article
- A Beginner's How-To Guide to Urban Population Genetics and Genomics.Ecology and evolution · 2026Review
- Assessing kinship detection: single nucleotide polymorphism array density and estimator comparison in white-tailed deer.G3 (Bethesda, Md.) · 2026Article
- Harnessing Deep Learning in Searching Wild Relatives of Domestic Animals.Molecular ecology resources · 2026Article
- ONYX: an alignment-free biological sex inference from high-throughput sequencing data.Frontiers in bioinformatics · 2026Article
- Molecular validation of carnivore scat surveys: Effects of climate, scat age, and observer experience on identification success.PloS one · 2026Article
- Genomic Insights Into the Origin, Decline and Recovery of the Once Critically Endangered Iberian Lynx.Molecular ecology · 2025Review
- Development of a cost-effective, multifunctional SNP panel and analysis workflow for Wolf monitoring in Finland.Scientific reports · 2025Article
- Validating a remote saliva collection tool for genomic analyses in free ranging dogs.Scientific reports · 2025Article
- Development of a SNP Panel for Geographic Assignment and Population Monitoring of Jaguars (Ecology and evolution · 2025Article
- Rewilded horses in European nature conservation - a genetics, ethics, and welfare perspective.Biological reviews of the Cambridge Philosophical Society · 2025Review
- Development and validation of a minimal SNP genotyping panel for the differentiation of Cannabis sativa cultivars.BMC genomics · 2025Article
- Advancements in noninvasive koala monitoring through combining Chlamydia detection with a targeted koala genotyping assay.Scientific reports · 2024Article
- Ectoparasites of the European wildcat (International journal for parasitology. Parasites and wildlife · 2024Article
- Endoparasites of peritoneal organs and skeletal muscles of the European wildcat (Felis silvestris) in Germany.Parasites & vectors · 2024Article
- A reduced SNP panel optimised for non-invasive genetic assessment of a genetically impoverished conservation icon, the European bison.Scientific reports · 2024Article
- Species-specific SNP arrays for non-invasive genetic monitoring of a vulnerable bat.Scientific reports · 2024Article
- Impact of feralization on evolutionary trajectories in the genomes of feral cat island populations.PloS one · 2024Article
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Authors and funding
18 authors.
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Abstract
The genomic era has led to an unprecedented increase in the availability of genome-wide data for a broad range of taxa. Wildlife management strives to make use of these vast resources to enable refined genetic assessments that enhance biodiversity conservation. However, as new genomic platforms emerge, problems remain in adapting the usually complex approaches for genotyping of noninvasively collected wildlife samples. Here, we provide practical guidelines for the standardized development of reduced single nucleotide polymorphism (SNP) panels applicable for microfluidic genotyping of degraded DNA samples, such as faeces or hairs. We demonstrate how microfluidic SNP panels can be optimized to efficiently monitor European wildcat (Felis silvestris S.) populations. We show how panels can be set up in a modular fashion to accommodate informative markers for relevant population genetics questions, such as individual identification, hybridization assessment and the detection of population structure. We discuss various aspects regarding the implementation of reduced SNP panels and provide a framework that will allow both molecular ecologists and practitioners to help bridge the gap between genomics and applied wildlife conservation.
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