Evidence map›Paper›PMID 31924833›Full record

ArticleScientific reports2020

Unraveling Asian Soybean Rust metabolomics using mass spectrometry and Molecular Networking approach.

Evandro Silva, José Perez da Graça, Carla Porto, Rodolpho Martin do Prado, Clara Beatriz Hoffmann-Campo, Mauricio Conrado Meyer, Estela de Oliveira Nunes, Eduardo Jorge Pilau

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Optimization of LC-MSMetabolites · 2022
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Frontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Evandro SilvaLaboratory of Biomolecules and Mass Spectrometry, Department of Chemistry, State University of Maringá, 5790, Colombo Av, Maringá, PR, 87020-080, Brazil.
José Perez da GraçaBrazilian Agricultural Research Corporation Soybean, Carlos João Strass Rd, Londrina, PR, 86001-970, Brazil.
Carla PortoLaboratory of Biomolecules and Mass Spectrometry, Department of Chemistry, State University of Maringá, 5790, Colombo Av, Maringá, PR, 87020-080, Brazil.
Rodolpho Martin do PradoLaboratory of Biomolecules and Mass Spectrometry, Department of Chemistry, State University of Maringá, 5790, Colombo Av, Maringá, PR, 87020-080, Brazil.
Clara Beatriz Hoffmann-CampoBrazilian Agricultural Research Corporation Soybean, Carlos João Strass Rd, Londrina, PR, 86001-970, Brazil.
Mauricio Conrado MeyerBrazilian Agricultural Research Corporation Soybean, Carlos João Strass Rd, Londrina, PR, 86001-970, Brazil.
Estela de Oliveira NunesBrazilian Agricultural Research Corporation Soybean, Carlos João Strass Rd, Londrina, PR, 86001-970, Brazil.
Eduardo Jorge PilauLaboratory of Biomolecules and Mass Spectrometry, Department of Chemistry, State University of Maringá, 5790, Colombo Av, Maringá, PR, 87020-080, Brazil. ejpilau@uem.br.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asian Soybean Rust (ASR), caused by the biotrophic fungus Phakopsora pachyrhizi, is a devastating disease with an estimated crop yield loss of up to 90%. Yet, there is a nerf of information on the metabolic response of soybean plants to the pathogen Untargeted metabolomics and Global Natural Products Social Molecular Networking platform approach was used to explore soybean metabolome modulation to P. pachyrhizi infection. Soybean plants susceptible to ASR was inoculated with P. pachyrhizi spore suspension and non-inoculated plants were used as controls. Leaves from both groups were collected 14 days post-inoculation and extracted using different extractor solvent mixtures. The extracts were analyzed on an ultra-high performance liquid chromatography system coupled to high-definition electrospray ionization-mass spectrometry. There was a significant production of defense secondary metabolites (phenylpropanoids, terpenoids and flavonoids) when P. pachyrhizi infected soybean plants, such as putatively identified liquiritigenin, coumestrol, formononetin, pisatin, medicarpin, biochanin A, glyoceollidin I, glyoceollidin II, glyoceollin I, glyoceolidin II, glyoceolidin III, glyoceolidin IV, glyoceolidin VI. Primary metabolites (amino acids, peptides and lipids) also were putatively identified. This is the first report using untargeted metabolomics and GNPS-Molecular Networking approach to explore ASR in soybean plants. Our data provide insights into the potential role of some metabolites in the plant resistance to ASR, which could result in the development of resistant genotypes of soybean to P. pachyrhizi, and effective and specific products against the pathogen.

Indexed as

Mass SpectrometryMetabolomicsGlycine maxPhakopsora pachyrhiziPlant DiseasesPlant Leaves

Identifiers

PMID31924833
PMCPMC6954191

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.