Evidence map›Paper›PMID 31921071›Full record

ArticleFrontiers in microbiology2019

Comparative Genomic Analysis of Soil Dwelling Bacteria Utilizing a Combinational Codon Usage and Molecular Phylogenetic Approach Accentuating on Key Housekeeping Genes.

Jayanti Saha, Barnan K Saha, Monalisha Pal Sarkar, Vivek Roy, Parimal Mandal, Ayon Pal

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jayanti SahaMicrobiology & Computational Biology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Barnan K SahaMicrobiology & Computational Biology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Monalisha Pal SarkarMycology & Plant Pathology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Vivek RoyMicrobiology & Computational Biology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Parimal MandalMycology & Plant Pathology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Ayon PalMicrobiology & Computational Biology Laboratory, Department of Botany, Raiganj University, Raiganj, India.
Raiganj University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil is a diversified and complex ecological niche, home to a myriad of microorganisms particularly bacteria. The physico-chemical complexities of soil results in a plethora of physiological variations to exist within the different types of soil dwelling bacteria, giving rise to a wide variation in genome structure and complexity. This serves as an attractive proposition to analyze and compare the genome of a large number soil bacteria to comprehend their genome complexity and evolution. In this study a combination of codon usage and molecular phylogenetics of the whole genome and key housekeeping genes like

Indexed as

atpD genecodon usage bias (CUB)housekeeping genesinfB genemolecular phylogeneticsrpoB genesoil bacteriatrpB gene

Identifiers

PMID31921071
PMCPMC6928123
OpenAlexW2996343211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.