Evidence map›Paper›PMID 31918861›Full record

ArticleTrends in genetics : TIG2020

Silencers, Enhancers, and the Multifunctional Regulatory Genome.

Marc S Halfon

Abstract readComment
In one paragraph

Article in Trends in genetics : TIG, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  4. Article
  5. Article
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  9. Article
  10. Review
  11. Context dependent activity of p63-bound gene regulatory elements.bioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Mouse genomic and cellular annotations.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author.

Marc S HalfonDepartment of Biochemistry, University at Buffalo-State University of New York, Buffalo, NY, USA; NY State Center of Excellence in Bioinformatics and Life Sciences, Buffalo, NY, USA; Department of Biological Sciences, University at Buffalo-State University of New York, Buffalo, NY, USA; Department of Biomedical Informatics, University at Buffalo-State University of New York, Buffalo, NY, USA; Department of Molecular and Cellular Biology and Program in Cancer Genetics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA. Electronic address: mshalfon@buffalo.edu.

Funding

REDfly: The regulatory sequence resource for Drosophila and other insectsR01GM114067 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI HALFON, MARC S · 2016 to 2019
$1.2M
NIGMS NIH HHS R01 GM114067
6 · The paper itself

Abstract

Negative regulation of gene expression by transcriptional silencers has been difficult to study due to limited defined examples. A new study by Gisselbrecht et al. has dramatically increased the number of identified silencers and reveals that they are bifunctional regulatory sequences that also act as gene expression-promoting enhancers.

Indexed as

DrosophilaEnhancer Elements, GeneticAnimals

Identifiers

PMID31918861
PMCPMC7457380

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.