Evidence map›Paper›PMID 31918655›Full record

ArticleEnvironmental health and preventive medicine2020

Transcriptome analysis of the hippocampus in environmental noise-exposed SAMP8 mice reveals regulatory pathways associated with Alzheimer's disease neuropathology.

Donghong Su, Wenlong Li, Huimin Chi, Honglian Yang, Xiaojun She, Kun Wang, Xiujie Gao, Kefeng Ma, Ming Zhang, Bo Cui

Open access · goldAbstract read
In one paragraph

Article in Environmental health and preventive medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
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  7. Molecular Mechanisms UnderlyingFrontiers in immunology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Donghong SuTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Wenlong LiTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Huimin ChiTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Honglian YangTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Xiaojun SheTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Kun WangTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Xiujie GaoTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Kefeng MaTianjin Institute of Environmental and Operational Medicine, Tianjin, China.
Ming ZhangTianjin Centers for Disease Control and Prevention, Tianjin, China. mingle1981@163.com.
Bo CuiTianjin Institute of Environmental and Operational Medicine, Tianjin, China. iamcuib@sina.com.ORCID http://orcid.org/0000-0001-6869-2523
Tianjin Centers for Disease Control and Prevention · CNTianjin Vocational Institute · CNWeifang Medical University · CN

Funding

National Natural Science Foundation of China 81673136Natural Science Foundation of Tianjin City 17JCZDJC34900
6 · The paper itself

Abstract

backgroundChronic noise exposure is one environmental hazard that is associated with genetic susceptibility factors that increase Alzheimer's disease (AD) pathogenesis. However, the comprehensive understanding of the link between chronic noise stress and AD is limited. Herein, we investigated the effects of chronic noise exposure on AD-like changes in senescence-accelerated mouse prone 8 (SAMP8).

methodsA total of 30 male SAMP8 mice were randomly divided into the noise-exposed group, the control group, and aging group (positive controls), and mice in the exposure group were exposed to 98 dB SPL white noise for 30 consecutive days. Transcriptome analysis and AD-like neuropathology of hippocampus were examined by RNA sequencing and immunoblotting. Enzyme-linked immunosorbent assay and real-time PCR were used to further determine the differential gene expression and explore the underlying mechanisms of chronic noise exposure in relation to AD at the genome level.

resultsChronic noise exposure led to amyloid beta accumulation and increased the hyperphosphorylation of tau at the Ser202 and Ser404 sites in young SAMP8 mice; similar observations were noted in aging SAMP8 mice. We identified 21 protein-coding transcripts that were differentially expressed: 6 were downregulated and 15 were upregulated after chronic noise exposure; 8 genes were related to AD. qPCR results indicated that the expression of Arc, Egr1, Egr2, Fos, Nauk1, and Per2 were significantly high in the noise exposure group. These outcomes mirrored the results of the RNA sequencing data.

conclusionsThese findings further revealed that chronic noise exposure exacerbated aging-like impairment in the hippocampus of the SAMP8 mice and that the protein-coding transcripts discovered in the study may be key candidate regulators involved in environment-gene interactions.

Indexed as

TranscriptomeAlzheimer DiseaseAnimalsDisease Models, AnimalGene Expression ProfilingHippocampusMaleNoiseRatsAlzheimer’s diseaseEnvironmental noiseRNA sequencingSAMP8 mice

Identifiers

PMID31918655
PMCPMC6953163
OpenAlexW2999165564

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.