Evidence map›Paper›PMID 31918006›Full record

ArticleBiochimica et biophysica acta. Molecular basis of disease2020

A pantothenate kinase-deficient mouse model reveals a gene expression program associated with brain coenzyme a reduction.

Chitra Subramanian, Jiangwei Yao, Matthew W Frank, Charles O Rock, Suzanne Jackowski

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular basis of disease, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Observational
  7. Review
  8. Article
  9. Article
  10. PKAN pathogenesis and treatment.Molecular genetics and metabolism · 2022
    Review
  11. Article
  12. Translational cancer research · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. The Pathophysiological Role of CoA.International journal of molecular sciences · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chitra SubramanianSt. Jude Children's Research Hospital, Memphis, TN 38105-3678, USA.
Jiangwei YaoSt. Jude Children's Research Hospital, Memphis, TN 38105-3678, USA.
Matthew W FrankSt. Jude Children's Research Hospital, Memphis, TN 38105-3678, USA.
Charles O RockSt. Jude Children's Research Hospital, Memphis, TN 38105-3678, USA.
Suzanne JackowskiSt. Jude Children's Research Hospital, Memphis, TN 38105-3678, USA. Electronic address: suzanne.jackowski@stjude.org.
St. Jude Children's Research Hospital · US

Funding

Regulation of Coenzyme A Levels by Pantothenate KinaseR01GM062896 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI JACKOWSKI, SUZANNE · 2002 to 2014
$4.0M
NIGMS NIH HHS R01 GM062896
6 · The paper itself

Abstract

Pantothenate kinase (PanK) is the first enzyme in the coenzyme A (CoA) biosynthetic pathway. The differential expression of the four-active mammalian PanK isoforms regulates CoA levels in different tissues and PANK2 mutations lead to Pantothenate Kinase Associated Neurodegeneration (PKAN). The molecular mechanisms that potentially underlie PKAN pathophysiology are investigated in a mouse model of CoA deficiency in the central nervous system (CNS). Both PanK1 and PanK2 contribute to brain CoA levels in mice and so a mouse model with a systemic deletion of Pank1 together with neuronal deletion of Pank2 was generated. Neuronal Pank2 expression in double knockout mice decreased starting at P9-11 triggering a significant brain CoA deficiency. The depressed brain CoA in the mice correlates with abnormal forelimb flexing and weakness that, in turn, contributes to reduced locomotion and abnormal gait. Biochemical analysis reveals a reduction in short-chain acyl-CoAs, including acetyl-CoA and succinyl-CoA. Comparative gene expression analysis reveals that the CoA deficiency in brain is associated with a large elevation of Hif3a transcript expression and significant reduction of gene transcripts in heme and hemoglobin synthesis. Reduction of brain heme levels is associated with the CoA deficiency. The data suggest a response to oxygen/glucose deprivation and indicate a disruption of oxidative metabolism arising from a CoA deficiency in the CNS.

Indexed as

AnimalsApoptosis Regulatory ProteinsBrainBrain ChemistryCoenzyme ADisease Models, AnimalFemaleGene Expression ProfilingGene Expression RegulationHemeHemoglobinsHumansMaleMiceMice, KnockoutNeuronsApoptosis Regulatory ProteinsCoenzyme AHemeHemoglobinsHif3a protein, mousepantothenate kinasePhosphotransferases (Alcohol Group Acceptor)Repressor ProteinsCoenzyme AMouse modelNeurodegenerationPantothenate kinasePKAN

Identifiers

PMID31918006
PMCPMC7078592
OpenAlexW3000330874

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.