Evidence map›Paper›PMID 31915913›Full record

ArticlePlant cell reports2020

An improved protocol for efficient transformation and regeneration of Setaria italica.

C M Santos, D Romeiro, J P Silva, M F Basso, H B C Molinari, D C Centeno

Abstract read
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In one paragraph

Article in Plant cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Efficient Embryogenic Callus Induction andPlants (Basel, Switzerland) · 2026
    Article
  2. Harnessing Setaria as a Model for CPlants (Basel, Switzerland) · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Multi-omics intervention inFrontiers in plant science · 2022
    Review
  13. Review
  14. Efficient genome editing and gene knockout inPlant biotechnology (Tokyo, Japan) · 2021
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

C M SantosUniversidade Federal Do ABC, São Bernardo Do Campo, SP, Brazil.
D RomeiroUniversidade Federal Do ABC, São Bernardo Do Campo, SP, Brazil.
J P SilvaUniversidade Federal Do ABC, São Bernardo Do Campo, SP, Brazil.
M F BassoGenetics and Biotechnology Laboratory, Embrapa Agroenergy, Brasília, DF, Brazil.
H B C MolinariGenetics and Biotechnology Laboratory, Embrapa Agroenergy, Brasília, DF, Brazil.
D C CentenoUniversidade Federal Do ABC, São Bernardo Do Campo, SP, Brazil. danilo.centeno@ufabc.edu.br.ORCID http://orcid.org/0000-0001-8015-4808

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2012/23838-7Fundação de Amparo à Pesquisa do Estado de São Paulo 2018/15576-9
6 · The paper itself

Abstract

key messageAn efficient and improved transformation method for functional genetics studies in S. italica, being a boon for the Setaria scientific community and for crop improvement. Foxtail millet (Setaria italica) is a short life cycle C4 plant, with sequenced genome, and a potential model plant for C4 species. S. italica is also important on a global food security and healthiness context due to its importance in arid and semi-arid areas. However, despite its importance, there are just few transformation protocols directed to this species. The current protocols reached about 5.5-9% of efficiency, which do not make it a valuable model organism. Different types of explants were used in the above mentioned methods, such as immature and mature inflorescence and shoot apex. However, these techniques have many limitations, such as unavailability of explants throughout the year and a crucial, laborious and considerable time-consuming selection. Aiming a simplified and efficient methodology, we adopted dry mature seeds as explants, which are available in abundance, are constant along the year and well responsive to tissue culture, in addition to a differentiated approach that reaches on an average 19.2% transformation efficiency of S. italica. Thus, we propose a protocol that optimizes the transformation efficiency of this cereal crop allowing a high increase on transformation and regeneration rates. Our transformation protocol provides an interesting tool for Setaria community research as well as enables new strategies for breeding enhanced productivity in the species.

Indexed as

Transformation, GeneticAgrobacterium tumefaciensCell Culture TechniquesCells, CulturedEdible GrainGenetic TechniquesGenetic VectorsPhenotypePlant BreedingPlant LeavesPlants, Genetically ModifiedRegenerationRNA InterferenceSeedsSetaria PlantC4 plantCereal cropModel organismRegenerationTransformation efficiency

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.