Evidence map›Paper›PMID 31915857›Full record

ArticleEuropean biophysics journal : EBJ2020

Nucleation-dependent amyloid fibrillation of human GRASP55 in aqueous solution.

S Thirupathi Reddy, Vladimir N Uversky, Antonio Jose Costa-Filho

Abstract read
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In one paragraph

Article in European biophysics journal : EBJ, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 14 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

S Thirupathi ReddyDepartment of Physics, Ribeirão Preto School of Philosophy, Science and Literature, University of Sao Paulo, Av. Bandeirantes 3900, Ribeirão Preto, SP, 14040-901, Brazil.
Vladimir N UverskyDepartment of Molecular Medicine, USF Health Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.
Antonio Jose Costa-FilhoDepartment of Physics, Ribeirão Preto School of Philosophy, Science and Literature, University of Sao Paulo, Av. Bandeirantes 3900, Ribeirão Preto, SP, 14040-901, Brazil. ajcosta@usp.br.
Universidade de São Paulo · BRUSF Health Byrd Alzheimer's Institute · US

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 308380/2013-4Fundação de Amparo à Pesquisa do Estado de São Paulo 2012/20367-3Fundação de Amparo à Pesquisa do Estado de São Paulo 2015/50366-7Fundação de Amparo à Pesquisa do Estado de São Paulo 2017/12146-0
6 · The paper itself

Abstract

GRASP55, one of the two human GRASP proteins, has been implicated in the organization of Golgi stacks and in unconventional protein secretion. However, the detailed molecular mechanisms supporting GRASP55 participation in those processes remain mostly unclear. We have shown that GRASP55 exists as monomers in solution, which transitions to amorphous aggregates with increasing temperatures. Here, we further investigated the formation of higher order structures of GRASP55 by exploring its amyloid fibrillation at 37 °C. Sequence-based AGGRESCAN analysis revealed that GRASP55 has ten aggregation "hot spots", preferentially concentrated in its N-terminal half. Congo Red, ThT, and circular dichroism assays suggested GRASP55 formed amyloid-like fibrils in a time-dependent manner at 37 °C. Dynamic light scattering showed the mean hydrodynamic radius of GRASP55 amyloid-like fibrils increased with increasing incubation times at 37 °C. Transmission electron microscopy and intrinsic fluorescence lifetime imaging showed that, upon increasing incubation time at 37 °C, GRASP55 yielded amyloid-like fibrils in a nucleation-dependent process via a sequence of events: lag-phase (monomers to oligomers), growth phase (oligomers to organized protofibrils), and plateau phase (protofibrils to amyloid-like fibrils). The insights gained herein may help in better understanding the mechanisms of GRASP55 amyloid fibrillation in vivo and its potential association with neurological disorders.

Indexed as

AmyloidBenzothiazolesCircular DichroismComputational BiologyCongo RedGolgi ApparatusGolgi Matrix ProteinsHumansHydrodynamicsKineticsLightMicroscopy, Electron, TransmissionNervous System DiseasesProtein ConformationProtein DomainsRecombinant ProteinsAmyloidBenzothiazolesCongo RedGolgi Matrix ProteinsGORASP2 protein, humanRecombinant Proteinsthioflavin TAggregation “hot spots”Amyloid fibrilsGRASP55MicroscopySpectroscopy

Identifiers

PMID31915857
OpenAlexW2998920179

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.