Evidence map›Paper›PMID 31915515›Full record

Trial reportOxidative medicine and cellular longevity2019

Weighted Gene Coexpression Network Analysis Identified MicroRNA Coexpression Modules and Related Pathways in Type 2 Diabetes Mellitus.

Tianyu Feng, Kexin Li, Pingping Zheng, Yanjun Wang, Yaogai Lv, Li Shen, Yang Chen, Zhiqiang Xue, Bo Li, Lina Jin and 1 more

Open access · hybridAbstract readClinical Trial
In one paragraph

Trial report in Oxidative medicine and cellular longevity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  14. Circulating Nucleic Acid-Based Biomarkers of Type 2 Diabetes.International journal of molecular sciences · 2021
    Review
  15. Review
  16. Article
  17. Review
  18. Serum microRNA Levels in Diabetes Mellitus.Diagnostics (Basel, Switzerland) · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Tianyu FengKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0001-9587-0639
Kexin LiKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0002-1599-7099
Pingping ZhengKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.
Yanjun WangNursing Department, The Second Hospital of Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0002-6000-755X
Yaogai LvKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0003-4995-3104
Li ShenKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0002-1577-9307
Yang ChenKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.
Zhiqiang XueKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0002-6728-7224
Bo LiKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.
Lina JinKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.
Yan YaoKey Laboratory of Organ Regeneration and Transplantation of Ministry of Education, School of Public Health, Jilin University, Changchun, Jilin, China.ORCID https://orcid.org/0000-0002-1823-3684
Jilin University · CNSecond Affiliated Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveType 2 diabetes mellitus (T2DM) is a metabolic disease with high incidence, which has seriously affected human life and health. MicroRNA, a short-chain noncoding RNA, plays an important role in T2DM. Identification of meaningful microRNA modules and the role of microRNAs provide a basis for searching potential biomarkers of T2DM. MATERIALS AND

methodsIn this study, three newly diagnosed patients with T2DM and three controls were selected for Whole Peripheral Blood RNA Sequencing to establish a microRNA library. Weighted gene coexpression network analysis (WGCNA) was applied to construct coexpression modules and to detect the trait-related microRNA modules; then, KEGG enrichment analysis was performed to predict the biological function of the interest modules, and candidate hub microRNAs were screened out by the value of module membership (MM) and protein-protein interaction (PPI) network.

resultFour microRNA modules (blue, brown, magenta, and turquoise) were highly associated with the T2DM; the number of miRNAs in these modules ranged from 41 to 469. The Fc gamma R-mediated phagocytosis pathway, Rap1 signaling pathway, MAPK signaling pathway, and Lysosome pathway were common pathways in three of the four modules. RPS27A, UBC, and RAC1 were the top three proteins in our study; their corresponding RNAs were miR-1271-5p, miR-130a-3p, miR-130b-3p, and miR-574-3p.

conclusionIn summary, this study identified blood miRNAs in human T2DM using RNA sequencing. The findings may be the foundation for understanding the potential role of miRNAs in T2DM.

Indexed as

Gene Expression RegulationGene Regulatory NetworksMAP Kinase Signaling SystemDiabetes Mellitus, Type 2FemaleHumansMaleMicroRNAsMicroRNAs

Identifiers

PMID31915515
PMCPMC6935443
OpenAlexW2995860305

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.