Evidence map›Paper›PMID 31914403›Full record

ArticleThe Journal of biological chemistry2020

The dNTPase activity of SAMHD1 is important for its suppression of innate immune responses in differentiated monocytic cells.

Zhihua Qin, Serena Bonifati, Corine St Gelais, Tai-Wei Li, Sun-Hee Kim, Jenna M Antonucci, Bijan Mahboubi, Jacob S Yount, Yong Xiong, Baek Kim and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
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  8. Article
  9. Review
  10. Review
  11. SAMHD1 in cancer: curse or cure?Journal of molecular medicine (Berlin, Germany) · 2022
    Review
  12. Article
  13. Review
  14. Article
  15. Frontiers in oncology · 2021
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Zhihua QinCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210; Department of Microbiology and Immunology, Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242.
Serena BonifatiCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210.
Corine St GelaisCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210.
Tai-Wei LiCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210.
Sun-Hee KimCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210.
Jenna M AntonucciCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210.
Bijan MahboubiCenter for Drug Discovery, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia 30322.
Jacob S YountDepartment of Microbial Infection and Immunity, Infectious Diseases Institute, The Ohio State University, Columbus, Ohio 43210.
Yong XiongDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520.
Baek KimCenter for Drug Discovery, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia 30322.
Li WuCenter for Retrovirus Research, Department of Veterinary Biosciences, The Ohio State University, Columbus, Ohio 43210; Department of Microbiology and Immunology, Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242; Department of Microbial Infection and Immunity, Infectious Diseases Institute, The Ohio State University, Columbus, Ohio 43210. Electronic address: li-wu@uiowa.edu.
The Ohio State University · USEmory University · USUniversity of Iowa · USYale University · US

Funding

Mechanisms of innate resistance to virus infectionsR01AI130110 · NIAID · OHIO STATE UNIVERSITY · PI Jacob Yount · 2017 to 2026
$4.3M
Lentivirus Replication Strategy and PathogenesisR01AI136581 · NIAID · EMORY UNIVERSITY · PI Baek Kim · 2018 to 2026
$3.9M
SAMHD1-mediated regulation of HIV-1 innate immunity and viral gene expressionR01AI141495 · NIAID · UNIVERSITY OF IOWA · PI WU, LI · 2019 to 2023
$1.9M
Mechanisms of HIV-1 RNA Methylation in Regulating Viral ReplicationR01AI150343 · NIAID · UNIVERSITY OF IOWA · PI WU, LI · 2019 to 2020
$768k
Comparative structure and function analyses of human and mouse SAMHD1 proteinsR21AI136737 · NIAID · YALE UNIVERSITY · PI XIONG, YONG · 2018 to 2019
$465k
SAMHD1 controls dNTP pool and HIV sensitivity to NRTIsR01AI150451 · NIAID · EMORY UNIVERSITY · PI KIM, BAEK · 2019 to 2019
$311k
NIAID NIH HHS R01 AI130110NIAID NIH HHS R01 AI136581NIAID NIH HHS R01 AI141495NIAID NIH HHS R01 AI150343NIAID NIH HHS R01 AI150451NIAID NIH HHS R21 AI136737
6 · The paper itself

Abstract

Sterile alpha motif and HD domain-containing protein 1 (SAMHD1) is a deoxynucleoside triphosphohydrolase (dNTPase) with a nuclear localization signal (NLS). SAMHD1 suppresses innate immune responses to viral infection and inflammatory stimuli by inhibiting the NF-κB and type I interferon (IFN-I) pathways. However, whether the dNTPase activity and nuclear localization of SAMHD1 are required for its suppression of innate immunity remains unknown. Here, we report that the dNTPase activity, but not nuclear localization of SAMHD1, is important for its suppression of innate immune responses in differentiated monocytic cells. We generated monocytic U937 cell lines stably expressing WT SAMHD1 or mutated variants defective in dNTPase activity (HD/RN) or nuclear localization (mNLS). WT SAMHD1 in differentiated U937 cells significantly inhibited lipopolysaccharide-induced expression of tumor necrosis factor α (

Indexed as

Immunity, InnateCell NucleusHumansMonocytesRespirovirus InfectionsSAM Domain and HD Domain-Containing Protein 1Sendai virusTHP-1 CellsU937 CellsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humancell differentiationdNTPase activityinflammationinnate immune responsesinnate immunityinterferonmonocytemonocytic cellsNF-kappa B (NF-KB)NF-kB transcription factorNF-κB activationnuclear localizationSAM domain and HD domain-containing protein 1 (SAMHD1)SAMHD1type I interferon (IFN-I)viral restriction factor

Identifiers

PMID31914403
PMCPMC7008377
OpenAlexW2997171616

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.