Evidence map›Paper›PMID 31914128›Full record

ArticlePLoS genetics2020

Dynamic and regulated TAF gene expression during mouse embryonic germ cell development.

Megan A Gura, Maria M Mikedis, Kimberly A Seymour, Dirk G de Rooij, David C Page, Richard N Freiman

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. A recently evolved TAF8 isoform arising from anbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Cell cycle regulation for meiosis in mammalian germ cells.The Journal of reproduction and development · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The Core Promoter Is a Regulatory Hub for Developmental Gene Expression.Frontiers in cell and developmental biology · 2021
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Megan A GuraBrown University, MCB Graduate Program and Department of Molecular Biology, Cell Biology and Biochemistry, Providence, RI, United States of America.ORCID 0000-0001-9635-4046
Maria M MikedisWhitehead Institute, Cambridge, MA, United States of America.ORCID 0000-0001-7800-7120
Kimberly A SeymourBrown University, MCB Graduate Program and Department of Molecular Biology, Cell Biology and Biochemistry, Providence, RI, United States of America.
Dirk G de RooijWhitehead Institute, Cambridge, MA, United States of America.
David C PageWhitehead Institute, Cambridge, MA, United States of America.ORCID 0000-0001-5489-6453
Richard N FreimanBrown University, MCB Graduate Program and Department of Molecular Biology, Cell Biology and Biochemistry, Providence, RI, United States of America.ORCID 0000-0002-7269-3630
Brown University · USWhitehead Institute for Biomedical Research · USHoward Hughes Medical Institute · US

Funding

TRAINING IN MOLECULAR &CELL BIOLOGY &BIOCHEMISTRYT32GM007601 · NIGMS · BROWN UNIVERSITY · PI MOWRY, KIMBERLY L. · 1985 to 2019
$6.4M
Dynamic Regulation of the Ovarian ReserveR01HD091848 · NICHD · BROWN UNIVERSITY · PI FREIMAN, RICHARD NEIL · 2018 to 2021
$1.7M
BD FACSAria Flow CytometerS10RR021051 · NCRR · BROWN UNIVERSITY · PI BROSSAY, LAURENT · 2007 to 2007
$403k
Ovarian-Specific Transcription Networks Regulated by the TFIID Subunit TAF4bR56HD065445 · NICHD · BROWN UNIVERSITY · PI FREIMAN, RICHARD NEIL · 2016 to 2016
$323k
Regulation of the cell cycle during meiotic prophase I by MEIOCF32HD093391 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI MIKEDIS, MARIA · 2017 to 2019
$151k
Unscrambling Eggs: TAF4B and Transcriptional Regulation of Meiosis I in Mouse OocytesF31HD097933 · NICHD · BROWN UNIVERSITY · PI GURA, MEGAN A · 2018 to 2021
$136k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR021051NICHD NIH HHS F31 HD097933NICHD NIH HHS F32 HD093391NICHD NIH HHS R01 HD091848NICHD NIH HHS R56 HD065445NIGMS NIH HHS T32 GM007601
6 · The paper itself

Abstract

Germ cells undergo many developmental transitions before ultimately becoming either eggs or sperm, and during embryonic development these transitions include epigenetic reprogramming, quiescence, and meiosis. To begin understanding the transcriptional regulation underlying these complex processes, we examined the spatial and temporal expression of TAF4b, a variant TFIID subunit required for fertility, during embryonic germ cell development. By analyzing published datasets and using our own experimental system to validate these expression studies, we determined that both Taf4b mRNA and protein are highly germ cell-enriched and that Taf4b mRNA levels dramatically increase from embryonic day 12.5-18.5. Surprisingly, additional mRNAs encoding other TFIID subunits are coordinately upregulated through this time course, including Taf7l and Taf9b. The expression of several of these germ cell-enriched TFIID genes is dependent upon Dazl and/or Stra8, known regulators of germ cell development and meiosis. Together, these data suggest that germ cells employ a highly specialized and dynamic form of TFIID to drive the transcriptional programs that underlie mammalian germ cell development.

Indexed as

GametogenesisGene Expression Regulation, DevelopmentalAdaptor Proteins, Signal TransducingAnimalsDeleted in Azoospermia 1 ProteinGerm CellsMaleMiceMice, Inbred C57BLRNA, MessengerTATA-Binding Protein Associated FactorsTranscription Factor TFIIDAdaptor Proteins, Signal TransducingDeleted in Azoospermia 1 ProteinRNA, MessengerStra8 protein, mouseTaf4b protein, mouseTATA-Binding Protein Associated FactorsTranscription Factor TFIID

Identifiers

PMID31914128
PMCPMC7010400
OpenAlexW2999893067

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.