Evidence map›Paper›PMID 31910446›Full record

ArticlePloS one2020

Genome-wide association study of metabolic syndrome in Korean populations.

Seung-Won Oh, Jong-Eun Lee, Eunsoon Shin, Hyuktae Kwon, Eun Kyung Choe, Su-Yeon Choi, Hwanseok Rhee, Seung Ho Choi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Seung-Won OhDepartment of Family Medicine, Healthcare System Gangnam Center, Seoul National University Hospital, Seoul, South Korea.ORCID 0000-0003-3800-0754
Jong-Eun LeeDNA Link, Inc., Seoul, South Korea.
Eunsoon ShinDNA Link, Inc., Seoul, South Korea.
Hyuktae KwonDepartment of Family Medicine, Seoul National University Hospital, Seoul, South Korea.
Eun Kyung ChoeDepartment of Surgery, Healthcare System Gangnam Center, Seoul National University Hospital, Seoul, South Korea.
Su-Yeon ChoiDepartment of Internal Medicine, Healthcare System Gangnam Center, Seoul National University Hospital, Seoul, South Korea.ORCID 0000-0001-9977-4740
Hwanseok RheeDNA Link, Inc., Seoul, South Korea.
Seung Ho ChoiDepartment of Internal Medicine, Healthcare System Gangnam Center, Seoul National University Hospital, Seoul, South Korea.
Seoul National University Hospital · KRDNA Link (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolic syndrome (MetS) which is caused by obesity and insulin resistance, is well known for its predictive capability for the risk of type 2 diabetes mellitus and cardiovascular disease. The development of MetS is associated with multiple genetic factors, environmental factors and lifestyle. We performed a genome-wide association study to identify single-nucleotide polymorphism (SNP) related to MetS in large Korean population based samples of 1,362 subjects with MetS and 6,061 controls using the Axiom® Korean Biobank Array 1.0. We replicated the data in another sample including 502 subjects with MetS and 1,751 controls. After adjusting for age and sex, rs662799 located in the APOA5 gene were significantly associated with MetS. 15 SNPs in GCKR, C2orf16, APOA5, ZPR1, and BUD13 were associated with high triglyceride (TG). 14 SNPs in APOA5, ALDH1A2, LIPC, HERPUD1, and CETP, and 2 SNPs in MTNR1B were associated with low high density lipoprotein cholesterol (HDL-C) and high fasting blood glucose respectively. Among these SNPs, 6 TG SNPs: rs1260326, rs1260333, rs1919127, rs964184, rs2075295 and rs1558861 and 11 HDL-C SNPs: rs4775041, rs10468017, rs1800588, rs72786786, rs173539, rs247616, rs247617, rs3764261, rs4783961, rs708272, and rs7499892 were first discovered in Koreans. Additional research is needed to confirm these 17 novel SNPs in Korean population.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAllelesAsian PeopleBlood GlucoseCardiovascular DiseasesCholesterol, HDLDiabetes Mellitus, Type 2FastingFemaleGenotypeHumansInsulin ResistanceMaleMetabolic SyndromeMiddle AgedBlood GlucoseCholesterol, HDL

Identifiers

PMID31910446
PMCPMC6946588
OpenAlexW3000359296

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.