Evidence map›Paper›PMID 31907678›Full record

ArticlePlanta2020

Cloning and functional characterization of a floral repressor gene from Lavandula angustifolia.

Rebecca S Wells, Ayelign M Adal, Lina Bauer, Elaheh Najafianashrafi, Soheil S Mahmoud

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Metabolic engineering of terpene metabolism in lavender.Beni-Suef University journal of basic and applied sciences · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Rebecca S WellsDepartment of Biology, The University of British Columbia, Okanagan Campus, 1177 Research Road, Kelowna, BC, V1V 1V7, Canada.
Ayelign M AdalDepartment of Biology, The University of British Columbia, Okanagan Campus, 1177 Research Road, Kelowna, BC, V1V 1V7, Canada.
Lina BauerDepartment of Biology, The University of British Columbia, Okanagan Campus, 1177 Research Road, Kelowna, BC, V1V 1V7, Canada.
Elaheh NajafianashrafiDepartment of Biology, The University of British Columbia, Okanagan Campus, 1177 Research Road, Kelowna, BC, V1V 1V7, Canada.
Soheil S MahmoudDepartment of Biology, The University of British Columbia, Okanagan Campus, 1177 Research Road, Kelowna, BC, V1V 1V7, Canada. soheil.mahmoud@ubc.ca.
University of British Columbia · CA

Funding

Natural Sciences and Engineering Research Council of Canada 2015-04858
6 · The paper itself

Abstract

MAIN

conclusionUsing RNA-Seq, we identified genes involved in floral development in lavenders and functionally characterized the floral repressor LaSVP. The molecular aspects of flower initiation and development have not been adequately investigated in lavender (Lavandula). In order to identify genes that control these processes, we employed RNA-Seq to obtain sequence information for transcripts originating from the vegetative shoot apical meristem (SAM) and developing inflorescence tissues of Lavandula angustifolia and Lavandula × intermedia plants, and assemble a comprehensive transcriptome of 105,294 contigs. Homology-based annotation provided gene ontology terms for the majority of transcripts, including over 100 genes homologous to those that control flower initiation and organ identity in Arabidopsis thaliana. Expression analysis revealed that most of these genes are differentially expressed during flower development. For example, LaSVP, a homolog of the floral repressor SHORT VEGETATIVE PHASE (SVP), was strongly expressed in vegetative SAM compared to developing flowers, implicating its potential involvement in flowering repression in lavender. To investigate LaSVP further, we constitutively expressed the gene in transformed A. thaliana plants, evaluating its effects on flower initiation and morphology. Expression of the LaSVP in A. thaliana delayed flowering and affected flower organ identity in a dosage-dependent manner. Two of the highest expressing lines produced sepals instead of petals and were sterile as they failed to develop proper seed pods. This study provides the foundation for future investigations aimed at elucidating flower initiation and development in lavender.

Indexed as

ArabidopsisArabidopsis ProteinsFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantLavandulaMeristemPlant ProteinsPlants, Genetically ModifiedArabidopsis ProteinsPlant ProteinsFloral developmentLavandulaMADS-Box transcription factorRNA-SeqShort vegetative phase

Identifiers

PMID31907678
OpenAlexW2998828927

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.