Evidence map›Paper›PMID 31907667›Full record

ArticleParasitology research2020

SLC11A1 (rs3731865) polymorphism and susceptibility to visceral leishmaniasis in HIV-coinfected patients from Northeastern Brazil.

Walter Lins Barbosa Júnior, Alda Maria Justo, Ana Maria Aguiar Dos Santos, Rodrigo Feliciano do Carmo, Fábio Lopes de Melo, Luydson Richardson Silva Vasconcelos, Zulma Maria de Medeiros

Abstract read
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In one paragraph

Article in Parasitology research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 3 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 syntheses or guidelines pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Prevalence of visceral leishmaniasis among people with HIV: a systematic review and meta-analysis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2023
    Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Walter Lins Barbosa JúniorDepartment of Parasitology, Instituto Aggeu Magalhães, Fundação Oswaldo Cruz, Av. Prof. Moraes Rego s/n, Recife, Pernambuco, 50740-465, Brazil. walterb716@gmail.com.ORCID https://orcid.org/0000-0002-8301-6600
Alda Maria JustoFaculdade de Ciências Médicas, Universidade de Pernambuco, Recife, Pernambuco, 50030-230, Brazil.
Ana Maria Aguiar Dos SantosDepartment of Parasitology, Instituto Aggeu Magalhães, Fundação Oswaldo Cruz, Av. Prof. Moraes Rego s/n, Recife, Pernambuco, 50740-465, Brazil.
Rodrigo Feliciano do CarmoUniversidade Federal do Vale do São Francisco, Petrolina, Pernambuco, 56304-917, Brazil.
Fábio Lopes de MeloDepartment of Parasitology, Instituto Aggeu Magalhães, Fundação Oswaldo Cruz, Av. Prof. Moraes Rego s/n, Recife, Pernambuco, 50740-465, Brazil.
Luydson Richardson Silva VasconcelosDepartment of Parasitology, Instituto Aggeu Magalhães, Fundação Oswaldo Cruz, Av. Prof. Moraes Rego s/n, Recife, Pernambuco, 50740-465, Brazil.
Zulma Maria de MedeirosDepartment of Parasitology, Instituto Aggeu Magalhães, Fundação Oswaldo Cruz, Av. Prof. Moraes Rego s/n, Recife, Pernambuco, 50740-465, Brazil.
Fundação Oswaldo Cruz · BRUniversidade de Pernambuco · BRUniversidade Federal do Vale do São Francisco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Following the emergence of human immunodeficiency virus (HIV)/acquired immunodeficiency syndrome (AIDS), the number of visceral leishmaniasis-HIV (VL-HIV) coinfections has increased worldwide, mainly in Brazil. The development of clinical forms of VL can be influenced by nutritional status, age, and host genetic factors, which are important variables determining susceptibility to disease. There are no studies with a candidate gene approach assayed directly in the VL-HIV-coinfected population. Herein, we determined and analyzed the associations of SLC11A1, LECT2, CCL1, CCL16, and IL4 genetic polymorphisms with susceptibility to VL-HIV coinfection in Northeastern Brazil. We analyzed 309 DNA samples extracted from the peripheral blood of HIV patients, and clinical and hematological data were collected from medical records. The diagnosis of VL was confirmed in 110 out of 309 patients; genotyping was carried out by TaqMan assays afterwards. Our results confirmed the association between the SLC11A1 polymorphism (rs3731865) and VL-HIV coinfection (p = 0.0206, OR 1.8126, 95% CI 1.1050-2.9727). In addition, the SLC11A1 genotype GG (p = 0.0050, OR 3.0395, 95% CI 1.4065-6.5789) and CD4+ T lymphocyte count (p = 0.0030, OR 0.9980, 95% CI 0.9970-0.9990) were associated with VL-HIV coinfection in a multivariate model. The polymorphism of the SLC11A1 gene (rs3731865) was associated with VL-HIV coinfection, suggesting a possible genetic mechanism involved in the susceptibility to VL in HIV patients. This finding can suggest new therapeutic targets and genetic markers for the VL-HIV-coinfected population.

Indexed as

Acquired Immunodeficiency SyndromeAdultBrazilCation Transport ProteinsCD4-Positive T-LymphocytesChemokine CCL1Chemokines, CCCoinfectionFemaleGenetic Predisposition to DiseaseGenotypeHumansIntercellular Signaling Peptides and ProteinsInterleukin-4Leishmaniasis, VisceralMaleCation Transport ProteinsCCL16 protein, humanCCL1 protein, humanChemokine CCL1Chemokines, CCIL4 protein, humanIntercellular Signaling Peptides and ProteinsInterleukin-4LECT2 protein, humanNatural Resistance-associated Macrophage Protein 1HIVPolymorphismsSusceptibilityVisceral leishmaniasis

Identifiers

PMID31907667
OpenAlexW3000050353

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.