Evidence map›Paper›PMID 31906854›Full record

ArticleBMC microbiology2020

HpaXpm, a novel harpin of Xanthomonas phaseoli pv. manihotis, acts as an elicitor with high thermal stability, reduces disease, and promotes plant growth.

Yue Liu, Xiaoyun Zhou, Wenbo Liu, Jiamin Huang, Qinghuan Liu, Jianzhang Sun, Xinfeng Cai, Weiguo Miao

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 28 citations in OpenAlex.

  1. Distinct immune pathways activated by harpin proteins inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Article
  2. The BASIDIN effector of the fungusFrontiers in plant science · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yue LiuInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Xiaoyun ZhouInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Wenbo LiuInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Jiamin HuangInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Qinghuan LiuInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Jianzhang SunInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Xinfeng CaiInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China.
Weiguo MiaoInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan Province, China. miao@hainu.edu.cn.ORCID 0000-0002-1774-5565
Hainan University · CN

Funding

Key Research and Development Project of Hainan Province (CN) ZDYF2018240National Key R&D Program of China 2018YFD0201105National Natural Science Foundation of China (CN) 31660033
6 · The paper itself

Abstract

backgroundHarpins are proteins secreted by the type III secretion system of Gram-negative bacteria during pathogen-plant interactions that can act as elicitors, stimulating defense and plant growth in many types of non-host plants. Harpin-treated plants have higher resistance, quality and yields and, therefore, harpin proteins may potentially have many valuable agricultural applications. Harpins are characterized by high thermal stability at 100 °C. However, it is unknown whether harpins are still active at temperatures above 100 °C or whether different temperatures affect the activity of the harpin protein in different ways. The mechanism responsible for the heat stability of harpins is also unknown.

resultsWe identified a novel harpin, HpaXpm, from the cassava blight bacteria Xanthomonas phaseoli pv. manihotis HNHK. The predicted secondary structure and 3-D structure indicated that the HpaXpm protein has two β-strand domains and two major α-helical domains located at the N- and C-terminal regions, respectively. A phylogenetic tree generated using the maximum likelihood method grouped HpaXpm in clade I of the Hpa1 group along with harpins produced by other Xanthomonas spp. (i.e., HpaG-Xag, HpaG-Xcm, Hpa1-Xac, and Hpa1Xm). Phenotypic assays showed that HpaXpm induced the hypersensitive response (HR), defense responses, and growth promotion in non-host plants more effectively than Hp1Xoo (X. oryzae pv. oryzae). Quantitative real-time PCR analysis indicated that HpaXpm proteins subjected to heat treatments at 100 °C, 150 °C, or 200 °C were still able to stimulate the expression of function-related genes (i.e., the HR marker genes Hin1 and Hsr203J, the defense-related gene NPR1, and the plant growth enhancement-related gene NtEXP6); however, the ability of heat-treated HpaXpm to induce HR was different at different temperatures.

conclusionsThese findings add a new member to the harpin family. HpaXpm is heat-stable up to 200 °C and is able to stimulate powerful beneficial biological functions that could potentially be more valuable for agricultural applications than those stimulated by Hpa1Xoo. We hypothesize that the extreme heat resistance of HpaXpm is because the structure of harpin is very stable and, therefore, the HpaXpm structure is less affected by temperature.

Indexed as

ArabidopsisBacterial Outer Membrane ProteinsGene Expression Regulation, BacterialHot TemperatureLikelihood FunctionsModels, MolecularNicotianaPhenotypePhylogenyPlant DevelopmentProtein DomainsProtein StabilityProtein Structure, SecondaryXanthomonasBacterial Outer Membrane ProteinsClassificationDefense responseHarpinHypersensitive responsePlant diseasePlant growthProtein structureThermal stabilityXanthomonas

Identifiers

PMID31906854
PMCPMC6945534
OpenAlexW3007258966

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.