Evidence map›Paper›PMID 31905224›Full record

ArticlePloS one2020

HCV genotype profile in Brazil of mono-infected and HIV co-infected individuals: A survey representative of an entire country.

Mariana Fernanda Rodrigues Nutini, James Hunter, Leila Giron, Ana Flavia Nacif Pinto Coelho Pires, Igor Massaki Kohiyama, Michelle Camargo, Maria Cecilia Araripe Sucupira, Adele Schwartz Benzaken, Paulo Abrão Ferreira, Hong-Ha M Truong and 1 more

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mariana Fernanda Rodrigues NutiniFederal University of Sao Paulo, Sao Paulo, Brazil.
James HunterFederal University of Sao Paulo, Sao Paulo, Brazil.ORCID 0000-0001-9524-0629
Leila GironWistar Institute-Philadelphia, Pennsylvania, United States of America.
Ana Flavia Nacif Pinto Coelho PiresUniversidade de Brasília, Brasilia, Brazil.
Igor Massaki KohiyamaAbbott Molecular, São Paulo, Brazil.
Michelle CamargoFederal University of Sao Paulo, Sao Paulo, Brazil.ORCID 0000-0003-3225-1819
Maria Cecilia Araripe SucupiraFederal University of Sao Paulo, Sao Paulo, Brazil.
Adele Schwartz BenzakenAIDS Health Care Foundation, Global Program, Sao Paulo, Brazil.
Paulo Abrão FerreiraFederal University of Sao Paulo, Sao Paulo, Brazil.
Hong-Ha M TruongDepartment of Medicine, University of California, San Francisco, California, United States of America.
Ricardo Sobhie DiazFederal University of Sao Paulo, Sao Paulo, Brazil.ORCID 0000-0002-8395-7304

Funding

Ujima Mentoring ProgramP30MH062246 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Sheri Ann Lippman · 2001 to 2026
$57.4M
NIMH NIH HHS P30 MH062246
6 · The paper itself

Abstract

introductionTo be eligible for government-provided treatment in Brazil, all HCV-infected individuals are required to be genotyped shortly after diagnosis. We describe the HCV genotype (G) profiles by geographic region, gender, age and HIV co-infection.

methodsWe assessed 29,071 genotypes collected from HCV-infected individuals from March 2016 to March 2018 (Abbott Real-Time HCV Genotype). We randomly selected 12,336 samples for HIV co-infection testing using an EIA rapid test kit (TR DPP HIV 1/2 Bio-Manguinhos). Descriptive statistical analyses were performed using R.

resultsOverall, HCV genotype distribution was 40.9% G1A, 30.2% G1B, 23.8% G3, 3.8% G2, 0.7% G4, 0.1% G5 and 0.6% with multiples genotypes. G1A prevalence was 44.4% among males and 35.8% among females. G1B and G2 were more prevalent in older individuals than G1A and G3. G3 was more prevalent in the South region. Of samples tested for HIV co-infection, 15% were HIV+. Median age among HCV/HIV co-infected individuals was 50 years old compared to 57 years old among mono-infected individuals. Distinct HCV genotype prevalence between HCV/HIV co-infected and HCV mono-infected individuals were respectively: G1A 60.6% versus 37.8%, G1B 15.2% versus 32.9%, and G3 18.9% versus 24.7%. G4 was detected among co-infected young men (3.5% versus 0.2% among mono-infected).

conclusionThe increasing prevalence of G3, as inferred by the younger ages of the HCV-infected individuals, poses an extra challenge with regards to disease progression. Distinct genotypical profiles between HCV mono-infection and HCV/HIV co-infection warrant future research in order to better understand and help mitigate HCV chains of transmission.

Indexed as

GenotypeAdultAgedBrazilCoinfectionFemaleHepatitis CHIV InfectionsHumansMaleMiddle AgedPopulation

Identifiers

PMID31905224
PMCPMC6944355

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.