Evidence map›Paper›PMID 31902112›Full record

ArticleEndocrine2020

Epigenetic mechanism in search for the pathomechanism of diabetic neuropathy development in diabetes mellitus type 1 (T1DM).

Joanna Gastoł, Przemysław Kapusta, Anna Polus, Ewelina Pitera, Maria Biela, Paweł Wołkow, Łukasz Pawliński, Beata Kieć-Wilk

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Endocrine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Mortality risk factors in newly diagnosed diabetic cardiac autonomic neuropathy.Clinical autonomic research : official journal of the Clinical Autonomic Research Society · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Genetic and Epigenomic Modifiers of Diabetic Neuropathy.International journal of molecular sciences · 2021
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Joanna GastołUniversity Hospital in Krakow, Kraków, Poland.ORCID http://orcid.org/0000-0002-2310-6882
Przemysław KapustaCenter for Medical Genomics- Omicron, Jagiellonian University Medical College, Kraków, Poland.
Anna PolusDepartment of Clinical Biochemistry, Jagiellonian University Medical College, Kraków, Poland.
Ewelina PiteraCenter for Medical Genomics- Omicron, Jagiellonian University Medical College, Kraków, Poland.
Maria BielaDepartment of Clinical Biochemistry, Jagiellonian University Medical College, Kraków, Poland.
Paweł WołkowCenter for Medical Genomics- Omicron, Jagiellonian University Medical College, Kraków, Poland.
Łukasz PawlińskiUniversity Hospital in Krakow, Kraków, Poland.
Beata Kieć-WilkUniversity Hospital in Krakow, Kraków, Poland. mbkiec@gmail.com.ORCID http://orcid.org/0000-0002-2526-9714
Jagiellonian University · PLKrakow Cardiovascular Research Institute · PL

Funding

National Science Center 2014/13/B/NZ4/00149
6 · The paper itself

Abstract

objectiveThe aim of this study was to check the hypothesis concerning the crucial role of DNA methylation (one of the epigenetic mechanisms) within selected genes related to the destruction and regeneration of neural cells and its input in the pathogenesis of diabetic neuropathy, using a model of the DNA in peripheral blood cells.

methodsA cross-sectional, case-control study was conducted, consisting of 24 adult Type 1 Diabetes Melitus (T1DM) patients with autonomic neuropathy (CAN), 25 T1DM patients without neuropathy and 25 matched, healthy adults acting as a control (Ctrl). The Ewing's tests, using the ProSciCard apparatus (Mewicon CATEEM-Tec GmbH), was employed to assess the severity of the patients' symptoms of autonomic neuropathy. For DNA methylation analysis, DNA material of each sample DNA after bisulfite conversion was used for the hybridization of BeadChips (Infinium Methylation EPIC Kit, Illumina), and imaged on the Illumina HiScan. The changes in the expression of selected genes were examined using real-time PCR. Probes were labeled using fluorescein amidite, FAM (Thermo Fisher Scientific). Amplification was performed using the continuous fluorescence detection 7900 HT Fast Real-Time PCR system (Thermo Fisher Scientific). The expression ratio of the target mRNA was normalized to the level of 18s RNA and compared with the control. Statistical analysis was performed using Statistica version 13.1. The statistically significant results were recognized, with a value of p < 0.05.

resultsClinical analysis of the investigated groups revealed a significantly higher percentage of personal insulin pump users in the group without neuropathy. The glucose metabolic control, based on the HbA1c level analysis, was also significantly better in T1DM patients without CAN. The Bumphunter method for DNA methylation analysis showed statistically significant regions related to the genes involved in nerve regeneration ninjurin 2 (NINJ2) and functionality (BR serine/threonine kinase 2 BRSK2, claudin 4 CLDN4). When compared with T1DM patients without neuropathy, T1DM patients with neuropathy showed significantly increased methylation in the first NINJ2 axon, and a lower level of DNA methylation in the region of the first intron of BRSK2, as well as the CLDN4 5'UTR regions. The qRT-PCR results confirmed the decreased expression of NINJ2 and CLDN4 genes in patients with T1DM with CAN.

conclusionsThe different DNA methylation profiles, correlating with the expression of genes related to nervous tissue development and regeneration in patients with T1DM with autonomic neuropathy provide evidence for the role of epigenetic mechanisms promoting the development of CAN, a chronic complication of T1DM.

Indexed as

Diabetes Mellitus, Type 1Diabetic NeuropathiesEpigenesis, GeneticAdultCase-Control StudiesCell Adhesion Molecules, NeuronalClaudin-4Cross-Sectional StudiesDNA MethylationHumansProtein Serine-Threonine KinasesBrsk2 protein, humanCell Adhesion Molecules, NeuronalClaudin-4CLDN4 protein, humanNINJ2 protein, humanProtein Serine-Threonine KinasesCardiac autonomic neuropathyDNA methylationMetabolic memoryType 1 diabetes mellitus

Identifiers

PMID31902112
OpenAlexW2997163361

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.