Evidence map›Paper›PMID 31901873›Full record

ArticleEBioMedicine2020

Altered DNA methylation of TRIM13 in diabetic nephropathy suppresses mesangial collagen synthesis by promoting ubiquitination of CHOP.

Yebei Li, Daijin Ren, Yunfeng Shen, Xiaoxu Zheng, Gaosi Xu

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Post‑translational modifications in diabetic kidney disease (Review).International journal of molecular medicine · 2026
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  11. Advances in the Epigenetic Mechanisms of Diabetic Nephropathy Pathogenesis.Diabetes, metabolic syndrome and obesity : targets and therapy · 2025
    Review
  12. The roles of the ubiquitin-proteasome system in renal disease.International journal of medical sciences · 2025
    Review
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Yebei LiDepartment of Nephrology, The Second Affiliated Hospital of Nanchang University, No.1 Minde Road, Donghu District, Nanchang, Jiangxi 330006, China.
Daijin RenDepartment of Nephrology, The Second Affiliated Hospital of Nanchang University, No.1 Minde Road, Donghu District, Nanchang, Jiangxi 330006, China.
Yunfeng ShenDepartment of Endocrinology, The Second Affiliated Hospital of Nanchang University, China.
Xiaoxu ZhengDivision of Renal Diseases & Hypertension, Department of Medicine, The George Washington University, Washington DC, United States.
Gaosi XuDepartment of Nephrology, The Second Affiliated Hospital of Nanchang University, No.1 Minde Road, Donghu District, Nanchang, Jiangxi 330006, China. Electronic address: gaosi_xu@sina.com.
Second Affiliated Hospital of Nanchang University · CNGeorge Washington University · USNanchang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMesangial collagen synthesis in renal glomeruli contributes to the pathogenesis of diabetic nephropathy (DN) which is one of the most serious complications of diabetes mellitus. However, the underlying mechanism of mesangial collagen synthesis is largely unknown.

methodsThe differential expression of CHOP and TRIM13 which is a well-defined E3 ubiquitin ligase was compared in renal biopsy samples from DN/normal renal tissues, in isolated glomeruli of diabetic/control mice, as well as in high glucose (HG) or TGF-β1-stimulated renal mesangial cells. Then the relationship between TRIM13 and CHOP was explored using the ubiquitination assay.

findingsWe found that the expression of TRIM13 was downregulated in renal biopsies, isolated glomeruli of diabetic mice, and HG/TGF-β1-stimulated renal mesangial cells, while the expression of CHOP was upregulated. An increased level of TRIM13 promoter methylation contributed to the deregulation of TRIM13 in renal glomeruli of DN. The ubiquitination assay confirmed that TRIM13 promoted ubiquitination and degradation of CHOP. Meanwhile, overexpressing TRIM13 attenuated DN-induced collagen synthesis and restored renal function in vitro and in vivo via downregulating CHOP.

interpretationOur findings demonstrated that overexpressed TRIM13 suppresses mesangial collagen synthesis in DN by promoting ubiquitination of CHOP, suggesting TRIM13 as a potential therapeutic target in treating DN.

Indexed as

UbiquitinationAnimalsBiopsyCell LineCollagenDiabetes Mellitus, ExperimentalDiabetic NephropathiesDNA-Binding ProteinsDNA MethylationDown-RegulationGlucoseHumansKidney Function TestsMesangial CellsMice, Inbred C57BLProteolysisCollagenDNA-Binding ProteinsGlucoseTranscription Factor CHOPTRIM13 protein, humanTRIM13 protein, mouseTripartite Motif ProteinsTumor Suppressor ProteinsUbiquitin-Protein LigasesCHOPDiabetic nephropathyDNA methylationTRIM13Ubiquitination

Identifiers

PMID31901873
PMCPMC6940716
OpenAlexW2998552874

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.