Evidence map›Paper›PMID 31901861›Full record

ArticleEBioMedicine2020

Genetic risk for dengue hemorrhagic fever and dengue fever in multiple ancestries.

Guillaume Pare, Binod Neupane, Sasha Eskandarian, Eva Harris, Scott Halstead, Lionel Gresh, Guillermina Kuan, Angel Balmaseda, Luis Villar, Elsa Rojas and 24 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Dengue encephalitis: what's new?Current opinion in infectious diseases · 2025
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  11. Article
  12. Serum Cortisol as a Biomarker of Severe Dengue.Tropical medicine and infectious disease · 2023
    Article
  13. Review
  14. Review
  15. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

34 authors at 14 institutions in 11 countries.

Guillaume PareDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada; Department of Health Research, Methods, Evidence, and Impact, Canada.
Binod NeupaneDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada.
Sasha EskandarianDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada.
Eva HarrisDivision of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, CA, United States.
Scott HalsteadDepartment of Preventive Medicine and Biometrics, Uniformed University of the Health Sciences, Bethesda, MD, United States.
Lionel GreshSustainable Sciences Institute, Managua, Nicaragua.
Guillermina KuanHealth Center Sócrates Flores Vivas, Ministry of Health, Managua, Nicaragua.
Angel BalmasedaSustainable Sciences Institute, Managua, Nicaragua; Laboratorio Nacional de Virología, Centro Nacional de Diagnóstico y Referencia, Ministry of Health, Managua, Nicaragua.
Luis VillarClinical Epidemiology Unit, Universidad Industrial de Santander, Bucaramanga, Colombia.
Elsa RojasCentro de Atención y Diagnóstico de Enfermedades Infecciosas, Bucaramanga, Colombia.
Jorge E OsorioUniversity of Wisconsin, Wisconsin, United States.
Dang Duc AnhNational Institute of Hygiene and Epidemiology, Hanoi, Vietnam.
Aruna Dharshan De SilvaGenetech Research Institute, Sri Lanka.
Sunil PremawansaDepartment of Zoology and Environmental Sciences, University of Colombo, Sri Lanka.
Gayani PremawansaGenetech Research Institute, Sri Lanka.
Ananda WijewickramaGenetech Research Institute, Sri Lanka.
Ivette LorenzanaDepartment of National Autonomous University of Honduras, Tegucigalpa, Honduras.
Leda ParhamDepartment of National Autonomous University of Honduras, Tegucigalpa, Honduras.
Cynthia RodriguezDepartment of National Autonomous University of Honduras, Tegucigalpa, Honduras.
Ildefonso Fernandez-SalasUniversidad Autonoma de Nuevo Leon, Mexico.
Rosa Sanchez-CasasUniversidad Autonoma de Nuevo Leon, Mexico.
Esteban E Diaz-GonzalezUniversidad Autonoma de Nuevo Leon, Mexico.
Khin Saw AyeMedical Research, Ministry of Health, Myanmar.
Win Lai MayMedical Research, Ministry of Health, Myanmar.
Min TheinMedical Research, Ministry of Health, Myanmar.
Filemon BucardoThe Faculty of Medical Sciences at the National Autonomous University of León, Nicaragua.
Yaoska ReyesThe Faculty of Medical Sciences at the National Autonomous University of León, Nicaragua.
Patricia BlandonThe Faculty of Medical Sciences at the National Autonomous University of León, Nicaragua.
Kenji HirayamaDepartment of Immunogenetics, Institute of Tropical Medicine, Nagasaki University, Nagaski, Japan.
Lan WeissDepartment of Immunogenetics, Institute of Tropical Medicine, Nagasaki University, Nagaski, Japan; Department of Immunology and Microbiology, Pasteur Institute, Ho Chi Minh City, Vietnam.
Pardeep SinghDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada.
Jennifer NewtonDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada.
Mark LoebDepartment of Pathology and Molecular Medicine, McMaster University, Ontario L8N 3Z5, Canada; Department of Health Research, Methods, Evidence, and Impact, Canada; Institute for Infectious Diseases Research, McMaster University Hamilton, Canada. Electronic address: loebm@mcmaster.ca.
Dengue Population Genetics Program
McMaster University · CAGenetech (Sri Lanka) · LKMinistry of Health · MMNational Autonomous University of Honduras · HNNational Autonomous University of Nicaragua · NIUniversidad Autónoma de Nuevo León · MXNagasaki University · JPSustainable Sciences Institute · USIndustrial University of Santander · COMinistry of Health · RWNational Institute Of Hygiene And Epidemiology · VNUniformed Services University of the Health Sciences · USUniversity of California, Berkeley · USUniversity of Colombo · LK

Funding

Nicaraguan Emerging and Endemic Diseases (NEED) Training ProgramD43TW010923 · FIC · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BECKER-DREPS, SYLVIA IRENE · 2018 to 2023
$1.4M
FIC NIH HHS D43 TW010923NIAID NIH HHS HHSN272201000026C
6 · The paper itself

Abstract

backgroundGenetic risk factors for dengue hemorrhagic fever/dengue shock syndrome (DHF/DSS) and dengue fever (DF) are limited, in particular there are sparse data on genetic risk across diverse populations.

methodsWe conducted a genome-wide association study (GWAS) in a derivation and validation sample of 7, 460 participants of Latin American, South Asian, and South East Asian ancestries. We then developed a weighted polygenic risk score (PRS) for each participant in each of the validation cohorts of the three ancestries to predict the risk of DHF/DSS compared to DF, DHF/DSS compared to controls, and, DF compared to controls.

findingsThe risk of DHF/DSS was significantly increased, odds ratio [OR] 1.84 (95%CI 1.47 to 2.31) (195 SNPs), compared to DF, fourth PRS quartile versus first quartile, in the validation cohort. The risk of DHF/DSS compared to controls was increased (OR=3.94; 95% CI 2.84 to 5.45) (278 SNPs), as was the risk of DF compared to controls (OR=1.97; 95%CI 1.63 to 2.39) (251 SNPs). Risk increased in a dose-dependent manner with increase in quartiles of PRS across comparisons. Significant associations persisted for PRS built within ancestries and applied to the same or different ancestries as well as for PRS built for one outcome (DHF/DSS or DF) and applied to the other.

interpretationThere is a strong genetic effect that predisposes to risk of DHF/DSS and DF. The genetic risk for DHF/DSS is higher than that for DF when compared to controls, and this effect persists across multiple ancestries.

Indexed as

Genetic Predisposition to DiseasePhylogenyAdultChildCohort StudiesDengueFemaleGenome-Wide Association StudyHumansMaleMultifactorial InheritanceRisk FactorsSevere DengueYoung AdultAncestryDengueGeneticsGWASRisk

Identifiers

PMID31901861
PMCPMC6940652
OpenAlexW2997529346

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.