Evidence map›Paper›PMID 31901859›Full record

ArticleEBioMedicine2020

Multi-cancer V-ATPase molecular signatures: A distinctive balance of subunit C isoforms in esophageal carcinoma.

Juliana Couto-Vieira, Pedro Nicolau-Neto, Evenilton Pessoa Costa, Frederico Firme Figueira, Tatiana de Almeida Simão, Anna Lvovna Okorokova-Façanha, Luis Felipe Ribeiro Pinto, Arnoldo Rocha Façanha

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. V-ATPase in cancer: mechanistic insights and therapeutic potentials.Cell communication and signaling : CCS · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. The V-ATPases in cancer and cell death.Cancer gene therapy · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. The V-ATPaseInternational journal of molecular sciences · 2021
    Review
  19. Article
  20. The Golgi as a "Proton Sink" in Cancer.Frontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Juliana Couto-VieiraLaboratório de Biologia Celular e Tecidual, Universidade Estadual do Norte Fluminense Darcy Ribeiro, Campos dos Goytacazes, RJ, Brazil.
Pedro Nicolau-NetoPrograma de Carcinogênese Molecular, Instituto Nacional de Câncer - INCA, Rio de Janeiro, RJ, Brazil.
Evenilton Pessoa CostaLaboratório de Biologia Celular e Tecidual, Universidade Estadual do Norte Fluminense Darcy Ribeiro, Campos dos Goytacazes, RJ, Brazil.
Frederico Firme FigueiraLaboratório de Biologia Celular e Tecidual, Universidade Estadual do Norte Fluminense Darcy Ribeiro, Campos dos Goytacazes, RJ, Brazil.
Tatiana de Almeida SimãoDepartamento de Bioquímica, Universidade Estadual do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Anna Lvovna Okorokova-FaçanhaLaboratório de Fisiologia e Bioquímica de Microrganismos, Universidade Estadual do Norte Fluminense Darcy Ribeiro, Campos dos Goytacazes, RJ, Brazil.
Luis Felipe Ribeiro PintoPrograma de Carcinogênese Molecular, Instituto Nacional de Câncer - INCA, Rio de Janeiro, RJ, Brazil; Departamento de Bioquímica, Universidade Estadual do Rio de Janeiro, Rio de Janeiro, RJ, Brazil. Electronic address: lfpinto@inca.gov.br.
Arnoldo Rocha FaçanhaLaboratório de Biologia Celular e Tecidual, Universidade Estadual do Norte Fluminense Darcy Ribeiro, Campos dos Goytacazes, RJ, Brazil. Electronic address: arnoldo@uenf.br.
State University of Norte Fluminense · BRUniversidade do Estado do Rio de Janeiro · BRInstituto Nacional do Câncer · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundV-ATPases are hetero-oligomeric enzymes consisting of 13 subunits and playing key roles in ion homeostasis and signaling. Differential expression of these proton pumps has been implicated in carcinogenesis and metastasis. To elucidate putative molecular signatures underlying these phenomena, we evaluated the expression of V-ATPase genes in esophageal squamous cell carcinoma (ESCC) and extended the analysis to other cancers.

methodsExpression of all V-ATPase genes were analyzed in ESCC by a microarray data and in different types of tumors available from public databases. Expression of C isoforms was validated by qRT-PCR in paired ESCC samples.

findingsA differential expression pattern of V-ATPase genes was found in different tumors, with combinations in up- and down-regulation leading to an imbalance in the expression ratios of their isoforms. Particularly, a high C1 and low C2 expression pattern accurately discriminated ESCC from normal tissues. Structural modeling of C2a isoform uncovered motifs for oncogenic kinases in an additional peptide stretch, and an actin-biding domain downstream to this sequence.

interpretationAltogether these data revealed that the expression ratios of subunits/isoforms could form a conformational code that controls the H

fundingThis work was supported by grants from CNPq and FAPERJ-Brazil.

Indexed as

AgedAmino Acid SequenceBiomarkers, TumorEsophageal NeoplasmsFemaleGene Expression Regulation, NeoplasticHumansIsoenzymesMaleMiddle AgedModels, MolecularProtein SubunitsRNA, MessengerROC CurveStructural Homology, ProteinVacuolar Proton-Translocating ATPasesBiomarkers, TumorIsoenzymesProtein SubunitsRNA, MessengerVacuolar Proton-Translocating ATPasesATP6V1C1ATP6V1C2Cancer biomarkerEsophageal cancerH(+) signaturesIsoform aV-ATPase

Identifiers

PMID31901859
PMCPMC6948166
OpenAlexW2998580429

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.