Evidence map›Paper›PMID 31900482›Full record

SynthesisThe Journal of infectious diseases2020

Population-Level Human Secretor Status Is Associated With Genogroup 2 Type 4 Norovirus Predominance.

Cory J Arrouzet, Karen Ellis, Anita Kambhampati, Yingxi Chen, Molly Steele, Ben Lopman

Open access · greenAbstract readSystematic Review
In one paragraph

Synthesis in The Journal of infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Cory J ArrouzetDepartment of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.
Karen EllisDepartment of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.
Anita KambhampatiDivision of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Yingxi ChenResearch School of Population Health, Australian National University, Canberra, Australia.
Molly SteeleDepartment of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.
Ben LopmanDepartment of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.
Emory University · USCenters for Disease Control and Prevention · USAustralian National University · AU

Funding

Graduate and Postdoctoral Training in ToxicologyT32ES012870 · NIEHS · EMORY UNIVERSITY · PI Carmen Joseph Marsit · 2004 to 2026
$9.1M
Preparing for the SARS-CoV2 vaccine: Modeling of transmission pathways, viral evolution and vaccination strategiesR01GM124280 · NIGMS · EMORY UNIVERSITY · PI LOPMAN, BENJAMIN A · 2018 to 2022
$2.2M
NIEHS NIH HHS T32 ES012870NIGMS NIH HHS R01 GM124280
6 · The paper itself

Abstract

backgroundNoroviruses are a leading cause of acute gastroenteritis. Genogroup 2 type 4 (GII.4) has been the dominant norovirus genotype worldwide since its emergence in the mid-1990s. Individuals with a functional fucosyltransferase-2 gene, known as secretors, have increased susceptibility to GII.4 noroviruses. We hypothesized that this individual-level trait may drive GII.4 norovirus predominance at the human population level.

methodsWe conducted a systematic review for studies reporting norovirus outbreak or sporadic case genotypes and merged this with data on proportions of human secretor status in various countries from a separate systematic review. We used inverse variance-weighted linear regression to estimate magnitude of the population secretor-GII.4 proportion association.

resultsTwo hundred nineteen genotype and 112 secretor studies with data from 38 countries were included in the analysis. Study-level GII.4 proportion among all noroviruses ranged from 0% to 100%. Country secretor proportion ranged from 43.8% to 93.9%. We observed a 0.69% (95% confidence interval, 0.19-1.18) increase in GII.4 proportion for each percentage increase in human secretor proportion, controlling for Human Development Index.

conclusionsNorovirus evolution and diversity may be driven by local population human host genetics. Our results may have vaccine development implications including whether specific antigenic formulations would be required for different populations.

Indexed as

Caliciviridae InfectionsDisease OutbreaksFemaleFucosyltransferasesGalactoside 2-alpha-L-fucosyltransferaseGenotypeGlobal HealthHumansMaleNorovirusPhylogenyFucosyltransferasesGalactoside 2-alpha-L-fucosyltransferasegenotypeGII.4noroviruspopulationsecretor

Identifiers

PMID31900482
PMCPMC7213563
OpenAlexW2998082028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.