Evidence map›Paper›PMID 31900031›Full record

ArticleEpigenetics

A regulatory role for CHD2 in myelopoiesis.

Farzaneh Shahin Varnoosfaderani, Anna Palau, Wenbo Dong, Jenna Persson, Mickaël Durand-Dubief, J Peter Svensson, Andreas Lennartsson

Open access · hybridAbstract read
In one paragraph

Article in Epigenetics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Farzaneh Shahin VarnoosfaderaniDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.
Anna PalauDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.
Wenbo DongDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.ORCID 0000-0002-5209-4884
Jenna PerssonDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet , Stockholm, Sweden.
Mickaël Durand-DubiefDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.ORCID 0000-0002-8556-4459
J Peter SvenssonDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.ORCID 0000-0002-5863-6250
Andreas LennartssonDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet , Stockholm, Sweden.
Karolinska Institutet · SEScience for Life Laboratory · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional program that dictates haematopoietic cell fate and differentiation requires an epigenetic regulatory and memory function, provided by a network of epigenetic factors that regulate DNA methylation, post-translational histone modifications and chromatin structure. Disturbed epigenetic regulation causes perturbations in the blood cell differentiation program that results in various types of haematopoietic disorders. Thus, accurate epigenetic regulation is essential for functional haematopoiesis. In this study, we used a CRISPR-Cas9 screening approach to identify new epigenetic regulators in myeloid differentiation. We designed a Chromatin-UMI CRISPR guide library targeting 1092 epigenetic regulators. Phorbol 12-myristate 13-acetate (PMA) treatment of the chronic myeloid leukaemia cell line K-562 was used as a megakaryocytic myeloid differentiation model. Both previously described developmental epigenetic regulators and novel factors were identified in our screen. In this study, we validated and characterized a role for the chromatin remodeller CHD2 in myeloid proliferation and megakaryocytic differentiation.

Indexed as

MyelopoiesisCell ProliferationChromatin Assembly and DisassemblyDNA-Binding ProteinsHumansK562 CellsMegakaryocytesTetradecanoylphorbol AcetateCHD2 protein, humanDNA-Binding ProteinsTetradecanoylphorbol AcetateCHD2CRISPR-Cas9 libraryepigeneticsmyelopoiesis

Identifiers

PMID31900031
PMCPMC7574388
OpenAlexW2998205591

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.