Evidence map›Paper›PMID 31899839›Full record

ArticleChembiochem : a European journal of chemical biology2020

An Expedient Synthesis of Flexible Nucleosides through Enzymatic Glycosylation of Proximal and Distal Fleximer Bases.

Sophie Vichier-Guerre, Therese C Ku, Sylvie Pochet, Katherine L Seley-Radtke

Open access · bronzeAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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  7. New Metal-Free Route towards Imidazole-Substituted Uridine.European journal of organic chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Sophie Vichier-GuerreUnité de Chimie et Biocatalyse, Institut Pasteur, CNRS UMR3523, 28, rue du Dr Roux, 75015, Paris, France.
Therese C KuDepartment of Chemistry & Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, Baltimore, MD, 21250, USA.
Sylvie PochetUnité de Chimie et Biocatalyse, Institut Pasteur, CNRS UMR3523, 28, rue du Dr Roux, 75015, Paris, France.
Katherine L Seley-RadtkeDepartment of Chemistry & Biochemistry, University of Maryland, Baltimore County, 1000 Hilltop Circle, Baltimore, MD, 21250, USA.ORCID 0000-0002-0154-3459
Centre National de la Recherche Scientifique · FRUniversity of Maryland, Baltimore County · US

Funding

Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
A Flexible Approach to Inhibiting HIV NCp7R21AI118470 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L · 2015 to 2016
$417k
Hybrid Nucleoside Scaffolds Targeting FilovirusesR21AI135252 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L · 2018 to 2019
$387k
NIAID NIH HHS R21 AI118470NIAID NIH HHS R21 AI135252NIGMS NIH HHS T32 GM066706
6 · The paper itself

Abstract

The structurally unique "fleximer" nucleosides were originally designed to investigate how flexibility in a nucleobase could potentially affect receptor-ligand recognition and function. Recently they have been shown to have low-to-sub-micromolar levels of activity against a number of viruses, including coronaviruses, filoviruses, and flaviviruses. However, the synthesis of distal fleximers in particular has thus far been quite tedious and low yielding. As a potential solution to this issue, a series of proximal fleximer bases (flex-bases) has been successfully coupled to both ribose and 2'-deoxyribose sugars by using the N-deoxyribosyltransferase II of Lactobacillus leichmannii (LlNDT) and Escherichia coli purine nucleoside phosphorylase (PNP). To explore the range of this facile approach, transglycosylation experiments on a thieno-expanded tricyclic heterocyclic base, as well as several distal and proximal flex-bases were performed to determine whether the corresponding fleximer nucleosides could be obtained in this fashion, thus potentially significantly shortening the route to these biologically significant compounds. The results of those studies are reported herein.

Indexed as

Escherichia coliGlycosylationLactobacillus leichmanniiMolecular StructureNucleosidesPentosyltransferasesPurine-Nucleoside Phosphorylasenucleoside deoxyribosyltransferase IINucleosidesPentosyltransferasesPurine-Nucleoside Phosphorylasebiocatalysisdeoxyribosyltransferasefleximersnucleosidespurine nucleoside phosphorylase

Identifiers

PMID31899839
PMCPMC7228337
OpenAlexW2996906764

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.