Evidence map›Paper›PMID 31898704›Full record

ArticleNatural product reports2020

Biosynthetic gene clusters and the evolution of fungal chemodiversity.

Antonis Rokas, Matthew E Mead, Jacob L Steenwyk, Huzefa A Raja, Nicholas H Oberlies

Open access · greenAbstract read
In one paragraph

Article in Natural product reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed, 1 pooled it
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 1 synthesis or guideline pooled it, 169 citations in OpenAlex.

  1. BioprospectingFrontiers in fungal biology · 2021
    Pooled it
  2. Article
  3. Opportunistic pathogenicity in fungi can transcend species boundaries.bioRxiv : the preprint server for biology · 2026
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  6. Anthracaurisin A─Discovery of a CytotoxicJournal of natural products · 2026
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  8. Review
  9. Phytochemical Profiling ofPlants (Basel, Switzerland) · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Antonis RokasDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA. antonis.rokas@vanderbilt.edu.
Matthew E Mead
Jacob L Steenwyk
Huzefa A Raja
Nicholas H Oberlies
Vanderbilt University · USUniversity of North Carolina at Greensboro · US

Funding

Project 3:Isolation Chemistry of Filamentous Fungi and Biological EvaluationP01CA125066 · NCI · OHIO STATE UNIVERSITY · PI JIMMY ORJALA · 2007 to 2026
$27.2M
Howard Hughes Medical InstituteNCI NIH HHS P01 CA125066
6 · The paper itself

Abstract

Covering: up to 2019Fungi produce a remarkable diversity of secondary metabolites: small, bioactive molecules not required for growth but which are essential to their ecological interactions with other organisms. Genes that participate in the same secondary metabolic pathway typically reside next to each other in fungal genomes and form biosynthetic gene clusters (BGCs). By synthesizing state-of-the-art knowledge on the evolution of BGCs in fungi, we propose that fungal chemodiversity stems from three molecular evolutionary processes involving BGCs: functional divergence, horizontal transfer, and de novo assembly. We provide examples of how these processes have contributed to the generation of fungal chemodiversity, discuss their relative importance, and outline major, outstanding questions in the field.

Indexed as

Evolution, MolecularGenes, FungalMultigene FamilyBiosynthetic PathwaysFungiGene Transfer, HorizontalHumansSecondary MetabolismSpecies Specificity

Identifiers

PMID31898704
PMCPMC7332410
OpenAlexW2997301107

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.